RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 GDF6Q6KF10 455 aaPredicted RBP10.36□□□□□ -0.75
UBBP4-201ENST00000583708 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 PADI6Q6TGC4 694 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 CEP57L1Q8IYX8 460 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 DIS3LQ8TF46 1054 aaKnown RBP10.36□□□□□ -0.75
UBBP4-201ENST00000583708 LARP4BQ92615 738 aaKnown RBP10.36□□□□□ -0.75
UBBP4-201ENST00000583708 KCNN1Q92952 543 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 DRC1Q96MC2 740 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 INO80BQ9C086 356 aaPredicted RBP10.36□□□□□ -0.75
UBBP4-201ENST00000583708 BHMT2Q9H2M3 363 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 ATP6V0A4Q9HBG4 840 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 WRAP73Q9P2S5 460 aaPredicted RBP10.36□□□□□ -0.75
UBBP4-201ENST00000583708 ODF2LQ9ULJ1 636 aa10.36□□□□□ -0.75
UBBP4-201ENST00000583708 FRMPD3Q5JV73 1810 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 PP2D1A8MPX8 630 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 H0YCG3 227 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 M0QZ92 97 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 EVI5O60447 810 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 B4GALT4O60513 344 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 CYP2C9P11712 490 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 ATN1P54259 1190 aaPredicted RBP10.35□□□□□ -0.75
UBBP4-201ENST00000583708 SLC12A3P55017 1021 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 FAM160A1Q05DH4 1040 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 FAAP100Q0VG06 881 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 TFDP1Q14186 410 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 KARSQ15046 597 aaKnown RBP10.35□□□□□ -0.75
UBBP4-201ENST00000583708 ECM1Q16610 540 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 LRRC26Q2I0M4 334 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 MTERF2Q49AM1 385 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 EFCAB12Q6NXP0 572 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 C1orf186Q6ZWK4 172 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 USP49Q70CQ1 688 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 ZNF410Q86VK4 478 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 KIAA0319LQ8IZA0 1049 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 FSIP1Q8NA03 581 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 PIGOQ8TEQ8 1089 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 PSPC1Q8WXF1 523 aaKnown RBP10.35□□□□□ -0.75
UBBP4-201ENST00000583708 MTRQ99707 1265 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 NFKBIZQ9BYH8 718 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 TMEM39AQ9NV64 488 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 KBTBD4Q9NVX7 518 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 SEL1LQ9UBV2 794 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 TBX21Q9UL17 535 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 ATP11BQ9Y2G3 1177 aa10.35□□□□□ -0.75
UBBP4-201ENST00000583708 E9PMD0 336 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 POLR2DO15514 142 aaKnown RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 TREHO43280 583 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 PQBP1O60828 265 aaKnown RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 PFKMP08237 780 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 MAPTP10636 758 aaKnown RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 SELPP16109 830 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 PFKFB1P16118 471 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 GAP43P17677 238 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 ARL2P36404 184 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 NPEPPSP55786 919 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 CHMP4BP1P59074 171 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 EMC2Q15006 297 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 ZRSR1Q15695 479 aaKnown RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 E2F4Q16254 413 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 TRIM60Q495X7 471 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 RINT1Q6NUQ1 792 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 RPUSD2Q8IZ73 545 aaKnown RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 METTL13Q8N6R0 699 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 IFT74Q96LB3 600 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 NTPCRQ9BSD7 190 aaKnown RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 TRPV6Q9H1D0 765 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 BLOC1S4Q9NUP1 217 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 RNF216Q9NWF9 866 aaPredicted RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 LARSQ9P2J5 1176 aaKnown RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 SUCLA2Q9P2R7 463 aaPredicted RBP10.34□□□□□ -0.75
UBBP4-201ENST00000583708 KAT6AQ92794 2004 aa10.34□□□□□ -0.75
UBBP4-201ENST00000583708 MYH15Q9Y2K3 1946 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 A0A1B0GVL5 298 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 PVALEFA0A1B0GWK0 134 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 ZNF202O95125 648 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 MBD3O95983 291 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 TIMP1P01033 207 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 EFNA5P52803 228 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 CRYBB1P53674 252 aaPredicted RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 SMTNP53814 917 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 IGBP1P78318 339 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 MRPS6P82932 125 aaKnown RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 TRIM71Q2Q1W2 868 aaKnown RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 NAALADL2Q58DX5 795 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 SPECC1Q5M775 1068 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 SRGAP1Q7Z6B7 1085 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 TMEM199Q8N511 208 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 DPF3Q92784 378 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 CCDC47Q96A33 483 aaKnown RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 CTAGE1Q96RT6 745 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 C7orf25Q9BPX7 421 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 NOC4LQ9BVI4 516 aaKnown RBP10.33□□□□□ -0.76
UBBP4-201ENST00000583708 C2orf40Q9H1Z8 148 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 HIPK3Q9H422 1215 aa10.33□□□□□ -0.76
UBBP4-201ENST00000583708 SUGCTQ9HAC7 445 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms