RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 PVALEFA0A1B0GWK0 134 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 POTEMA6NI47 508 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 BIN1O00499 593 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 DUSP11O75319 330 aaKnown RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 RHOBTB3O94955 611 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 RPN1P04843 607 aaKnown RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 CUL4BQ13620 913 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 PLS1Q14651 629 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 NCAPHQ15003 741 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 COBLL1Q53SF7 1204 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 ZNF658Q5TYW1 1059 aaPredicted RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 SLC30A10Q6XR72 485 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 GRAMD1CQ8IYS0 662 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 RASSF8Q8NHQ8 419 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 ENOX1Q8TC92 643 aaKnown RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 LARP4BQ92615 738 aaKnown RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 RAD54LQ92698 747 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 GPRASP2Q96D09 838 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 CDK5RAP3Q96JB5 506 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 NOC4LQ9BVI4 516 aaKnown RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 TRIM9Q9C026 710 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 A1CFQ9NQ94 594 aaKnown RBP13.31□□□□□ -0.28
GGA3-217ENST00000583667 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
GGA3-217ENST00000583667 BECN2A8MW95 431 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 GOLGA6L19H0YKK7 550 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
GGA3-217ENST00000583667 DHX15O43143 795 aaKnown RBP13.3□□□□□ -0.28
GGA3-217ENST00000583667 KLRC4O43908 158 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 NR3C2P08235 984 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
GGA3-217ENST00000583667 SPATA31C1P0DKV0 1188 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 ARP10275 920 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 CCND2P30279 289 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 CCT6AP40227 531 aaKnown RBP13.3□□□□□ -0.28
GGA3-217ENST00000583667 PPP1R2P41236 205 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 EPHA7Q15375 998 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 LRCH2Q5VUJ6 765 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 NSMFQ6X4W1 530 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 CATSPER3Q86XQ3 398 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 SCLYQ96I15 445 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 INPP4AQ96PE3 977 aaPredicted RBP13.3□□□□□ -0.28
GGA3-217ENST00000583667 ZNF577Q9BSK1 485 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 AGO4Q9HCK5 861 aaKnown RBP13.3□□□□□ -0.28
GGA3-217ENST00000583667 KCNH7Q9NS40 1196 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 HOMER2Q9NSB8 354 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 DCHS1Q96JQ0 3298 aa13.3□□□□□ -0.28
GGA3-217ENST00000583667 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 KRT37O76014 449 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 MYL5Q02045 173 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 ECM1Q16610 540 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 HS1BP3Q53T59 392 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 GNASQ5JWF2 1037 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 FOXR2Q6PJQ5 311 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 GIMAP8Q8ND71 665 aaPredicted RBP13.29□□□□□ -0.28
GGA3-217ENST00000583667 RDM1Q8NG50 284 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 IL31RAQ8NI17 732 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 PHOSPHO2Q8TCD6 241 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 CCDC47Q96A33 483 aaKnown RBP13.29□□□□□ -0.28
GGA3-217ENST00000583667 CDHR1Q96JP9 859 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 MMP19Q99542 508 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 SENP7Q9BQF6 1050 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 TEKT3Q9BXF9 490 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 FAM86C1Q9NVL1 165 aa13.29□□□□□ -0.28
GGA3-217ENST00000583667 COL11A1P12107 1806 aaPredicted RBP13.29□□□□□ -0.28
GGA3-217ENST00000583667 ADCY6O43306 1168 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 GAS7O60861 476 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 MED24O75448 989 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 SLITRK3O94933 977 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 LYPLA2O95372 231 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
GGA3-217ENST00000583667 EDNRBP24530 442 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 ICAM3P32942 547 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 GJA9P57773 515 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 TPM4P67936 248 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 ZP2Q05996 745 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 EHHADHQ08426 723 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 PSMD2Q13200 908 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 PUS10Q3MIT2 529 aaKnown RBP13.28□□□□□ -0.28
GGA3-217ENST00000583667 UNC13DQ70J99 1090 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 FAM133AQ8N9E0 248 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 SYT2Q8N9I0 419 aaPredicted RBP13.28□□□□□ -0.28
GGA3-217ENST00000583667 STAMQ92783 540 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 GJA10Q969M2 543 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 PRRX2Q99811 253 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 EIF2AK1Q9BQI3 630 aaKnown RBP13.28□□□□□ -0.28
GGA3-217ENST00000583667 TRPV6Q9H1D0 765 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 UPF3AQ9H1J1 476 aaKnown RBP13.28□□□□□ -0.28
GGA3-217ENST00000583667 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
GGA3-217ENST00000583667 ADD3Q9UEY8 706 aaKnown RBP13.28□□□□□ -0.28
GGA3-217ENST00000583667 KIAA1024Q9UPX6 916 aa13.28□□□□□ -0.28
GGA3-217ENST00000583667 DNM3Q9UQ16 869 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms