RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	UCHL3	P15374	230 aa		13.32	□□□□□ -0.28
STRADA-222	ENST00000583085	GAP43	P17677	238 aa		13.32	□□□□□ -0.28
STRADA-222	ENST00000583085	BAAT	Q14032	418 aa	Predicted RBP	13.32	□□□□□ -0.28
STRADA-222	ENST00000583085	RNF207	Q6ZRF8	634 aa		13.32	□□□□□ -0.28
STRADA-222	ENST00000583085	COG1	Q8WTW3	980 aa		13.32	□□□□□ -0.28
STRADA-222	ENST00000583085	RIT2	Q99578	217 aa		13.32	□□□□□ -0.28
STRADA-222	ENST00000583085	UBIAD1	Q9Y5Z9	338 aa		13.32	□□□□□ -0.28
STRADA-222	ENST00000583085	PARP14	Q460N5	1801 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	ZMYND10	O75800	440 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	MYCN	P04198	464 aa	Predicted RBP	13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	EPB41	P11171	864 aa	Known RBP	13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	RPS12	P25398	132 aa	Known RBP	13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	PLA2G4A	P47712	749 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	NAP1L1	P55209	391 aa	Known RBP	13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	BACE1	P56817	501 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	VSNL1	P62760	191 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	SP4	Q02446	784 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	PLA2G4F	Q68DD2	849 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	NFRKB	Q6P4R8	1299 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	ZNF662	Q6ZS27	426 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	KRT222	Q8N1A0	295 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	PCIF1	Q9H4Z3	704 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	FAM53C	Q9NYF3	392 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	GCNT4	Q9P109	453 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	KIAA1217	Q5T5P2	1943 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	SERPING1	P05155	500 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	PTPRA	P18433	802 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	NPEPPS	P55786	919 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	PTK2	Q05397	1052 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	KLHL30	Q0D2K2	578 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	PTPRO	Q16827	1216 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	PCNX4	Q63HM2	1172 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	MCF2L2	Q86YR7	1114 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	FAM186B	Q8IYM0	893 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	LRRN2	O75325	713 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	CCNE2	O96020	404 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	ZNF131	P52739	623 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	KLHDC7A	Q5VTJ3	777 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	BORCS6	Q96GS4	357 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	AGPAT3	Q9NRZ7	376 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085	RNF146	Q9NTX7	359 aa		13.31	□□□□□ -0.28
STRADA-222	ENST00000583085		K7ENM7	598 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	RPL13	P26373	211 aa	Known RBP	13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	SOX10	P56693	466 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	BMS1	Q14692	1282 aa	Known RBP	13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	ARHGEF16	Q5VV41	709 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	SNRNP48	Q6IEG0	339 aa	Known RBP	13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	EHBP1	Q8NDI1	1231 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	SPAG5	Q96R06	1193 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	PDCD2L	Q9BRP1	358 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	SIX2	Q9NPC8	291 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.3	□□□□□ -0.28	8e-25	■■■■■ 264
STRADA-222	ENST00000583085	PXMP2	Q9NR77	195 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	GGA3	Q9NZ52	723 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	DOCK1	Q14185	1865 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	RLF	Q13129	1914 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	ZBED4	O75132	1171 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	C2orf54	Q08AI8	447 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	ASIC2	Q16515	512 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	CBWD6	Q4V339	395 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	CBWD3	Q5JTY5	395 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	CBWD5	Q5RIA9	395 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	SCYL3	Q8IZE3	742 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	ZNF280C	Q8ND82	737 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	ARFGAP3	Q9NP61	516 aa		13.3	□□□□□ -0.28
STRADA-222	ENST00000583085	P4HB	P07237	508 aa	Known RBP	13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	KLRC1	P26715	233 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	RARRES1	P49788	294 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	HIRA	P54198	1017 aa	Predicted RBP	13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	IRF2BP2	Q7Z5L9	587 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	SYCP3	Q8IZU3	236 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	CAGE1	Q8TC20	777 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	EDEM3	Q9BZQ6	932 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	GOLPH3	Q9H4A6	298 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	SSU72P8	A0A1W2PR75	194 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	BACH1	O14867	736 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	EIF3D	O15371	548 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	BCR	P11274	1271 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	LONRF2	Q1L5Z9	754 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	KIFC3	Q9BVG8	833 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	TSGA10	Q9BZW7	698 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	GBP3	Q9H0R5	595 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	ABCB6	Q9NP58	842 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	PICK1	Q9NRD5	415 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	TACC1	O75410	805 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	YWHAB	P31946	246 aa	Known RBP	13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	DLG4	P78352	724 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	CENPF	P49454	3210 aa		13.29	□□□□□ -0.28
STRADA-222	ENST00000583085	PSMC2	P35998	433 aa	Known RBP	13.28	□□□□□ -0.28
STRADA-222	ENST00000583085	MATR3	P43243	847 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
STRADA-222	ENST00000583085	QARS	P47897	775 aa	Known RBP	13.28	□□□□□ -0.28
STRADA-222	ENST00000583085	TUBB2A	Q13885	445 aa		13.28	□□□□□ -0.28
STRADA-222	ENST00000583085	MSANTD4	Q8NCY6	345 aa		13.28	□□□□□ -0.28
STRADA-222	ENST00000583085	TRIM58	Q8NG06	486 aa		13.28	□□□□□ -0.28
STRADA-222	ENST00000583085	SGIP1	Q9BQI5	828 aa		13.28	□□□□□ -0.28
STRADA-222	ENST00000583085	TUBB2B	Q9BVA1	445 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms