RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 GPR32O75388 356 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 VTNP04004 478 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 XRCC6P12956 609 aaKnown RBP eCLIP18.33■□□□□ 0.52
RNF43-206ENST00000582293 MUTP22033 750 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 DNM1Q05193 864 aaKnown RBP18.33■□□□□ 0.52
RNF43-206ENST00000582293 GRB10Q13322 594 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 XKR9Q5GH70 373 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 RASIP1Q5U651 963 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 METTL13Q8N6R0 699 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 CSRNP2Q9H175 543 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 BMP2KQ9NSY1 1161 aaPredicted RBP18.33■□□□□ 0.52
RNF43-206ENST00000582293 DBR1Q9UK59 544 aaKnown RBP18.33■□□□□ 0.52
RNF43-206ENST00000582293 KIAA1024Q9UPX6 916 aa18.33■□□□□ 0.52
RNF43-206ENST00000582293 KDM3AQ9Y4C1 1321 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 LPIN1Q14693 890 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 KRT79Q5XKE5 535 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 OTUD6AQ7L8S5 288 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 RSPH3Q86UC2 560 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 NME8Q8N427 588 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 TMEM40Q8WWA1 233 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 AK8Q96MA6 479 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 ZNF396Q96N95 335 aaPredicted RBP18.32■□□□□ 0.52
RNF43-206ENST00000582293 NACC1Q96RE7 527 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 PPP1R16BQ96T49 567 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
RNF43-206ENST00000582293 SUGCTQ9HAC7 445 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 DDX19AQ9NUU7 478 aaKnown RBP18.32■□□□□ 0.52
RNF43-206ENST00000582293 PPME1Q9Y570 386 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 TRPV2Q9Y5S1 764 aa18.32■□□□□ 0.52
RNF43-206ENST00000582293 E9PMD0 336 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 PARNO95453 639 aaKnown RBP18.31■□□□□ 0.52
RNF43-206ENST00000582293 YEATS4O95619 227 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 LONP1P36776 959 aaKnown RBP18.31■□□□□ 0.52
RNF43-206ENST00000582293 RFC5P40937 340 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 TMEM119Q4V9L6 283 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 FBXO47Q5MNV8 452 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 TDHQ8IZJ6 230 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 EPSTI1Q96J88 318 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 ADAMTS10Q9H324 1103 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 AGO3Q9H9G7 860 aaKnown RBP18.31■□□□□ 0.52
RNF43-206ENST00000582293 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
RNF43-206ENST00000582293 STK24Q9Y6E0 443 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 LOXHD1Q8IVV2 1947 aa18.31■□□□□ 0.52
RNF43-206ENST00000582293 RPLP2P05387 115 aaKnown RBP18.3■□□□□ 0.52
RNF43-206ENST00000582293 PFKMP08237 780 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 GHRP10912 638 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 GPC3P51654 580 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 EMC2Q15006 297 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 STK38Q15208 465 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 KIZQ2M2Z5 673 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 IER5Q5VY09 327 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 PSRC1Q6PGN9 363 aaPredicted RBP18.3■□□□□ 0.52
RNF43-206ENST00000582293 OTOP2Q7RTS6 562 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 CABP7Q86V35 215 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 RPUSD2Q8IZ73 545 aaKnown RBP18.3■□□□□ 0.52
RNF43-206ENST00000582293 HERVK_113Q902F9 699 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 TMEM143Q96AN5 459 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 ZNF668Q96K58 619 aaPredicted RBP18.3■□□□□ 0.52
RNF43-206ENST00000582293 PLIN2Q99541 437 aa18.3■□□□□ 0.52
RNF43-206ENST00000582293 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 A0A1W2PPC1 479 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 SPTLC2O15270 562 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 PPP6R2O75170 966 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 FGBP02675 491 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 POLGP54098 1239 aaPredicted RBP18.29■□□□□ 0.52
RNF43-206ENST00000582293 NLRP11P59045 1033 aaKnown RBP18.29■□□□□ 0.52
RNF43-206ENST00000582293 AXDND1Q5T1B0 1012 aaPredicted RBP18.29■□□□□ 0.52
RNF43-206ENST00000582293 ATL3Q6DD88 541 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 KSR1Q8IVT5 923 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 KRI1Q8N9T8 703 aaKnown RBP18.29■□□□□ 0.52
RNF43-206ENST00000582293 DBF4BQ8NFT6 615 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 SLC7A3Q8WY07 619 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 OSMRQ99650 979 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 CCSER1Q9C0I3 900 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 BHMT2Q9H2M3 363 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 SUCLA2Q9P2R7 463 aaPredicted RBP18.29■□□□□ 0.52
RNF43-206ENST00000582293 AKT3Q9Y243 479 aa18.29■□□□□ 0.52
RNF43-206ENST00000582293 USO1O60763 962 aaKnown RBP18.28■□□□□ 0.52
RNF43-206ENST00000582293 DGAT1O75907 488 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 EYA4O95677 639 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 TMOD1P28289 359 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 KARSQ15046 597 aaKnown RBP18.28■□□□□ 0.52
RNF43-206ENST00000582293 CNKSR3Q6P9H4 555 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
RNF43-206ENST00000582293 MAP7D2Q96T17 732 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 MTRQ99707 1265 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 BLOC1S4Q9NUP1 217 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 RCOR1Q9UKL0 485 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 NOC2LQ9Y3T9 749 aaKnown RBP18.28■□□□□ 0.52
RNF43-206ENST00000582293 LAMA3Q16787 3333 aa18.28■□□□□ 0.52
RNF43-206ENST00000582293 A0A087X0B3 334 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 CD52P31358 61 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 ARL2P36404 184 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 ANP32AP39687 249 aaKnown RBP18.27■□□□□ 0.52
RNF43-206ENST00000582293 CRYBB1P53674 252 aaPredicted RBP18.27■□□□□ 0.52
RNF43-206ENST00000582293 ZRSR1Q15695 479 aaKnown RBP18.27■□□□□ 0.52
RNF43-206ENST00000582293 FAM109BQ6ICB4 259 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms