RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 WDR81Q562E7 1941 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 IGKV6-21A0A0C4DH24 114 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 STBD1O95210 358 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 CHRNA1P02708 482 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 ZSCAN22P10073 491 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-212ENST00000582122 CCT6AP40227 531 aaKnown RBP11.63□□□□□ -0.55
TOP3A-212ENST00000582122 KCNJ6P48051 423 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 SMAD3P84022 425 aaKnown RBP11.63□□□□□ -0.55
TOP3A-212ENST00000582122 CYP4A11Q02928 519 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 CTTNQ14247 550 aaKnown RBP11.63□□□□□ -0.55
TOP3A-212ENST00000582122 NBR1Q14596 966 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 XKR9Q5GH70 373 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 RASIP1Q5U651 963 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 TRAF7Q6Q0C0 670 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 TSHZ1Q6ZSZ6 1077 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 ANO5Q75V66 913 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 ZNF410Q86VK4 478 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 CATSPER3Q86XQ3 398 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 MAFAQ8NHW3 353 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-212ENST00000582122 TRAPPC12Q8WVT3 735 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 CDK5RAP3Q96JB5 506 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 SLC9A7Q96T83 725 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 INO80BQ9C086 356 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-212ENST00000582122 DHX33Q9H6R0 707 aaKnown RBP11.63□□□□□ -0.55
TOP3A-212ENST00000582122 AKT3Q9Y243 479 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 CDY2AQ9Y6F7 541 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 TANC1Q9C0D5 1861 aa11.63□□□□□ -0.55
TOP3A-212ENST00000582122 TMEM265A0A087WTH1 108 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 GPR182O15218 404 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 NBNO60934 754 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 CTSHP09668 335 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 ACRP10323 421 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 UBA7P41226 1012 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 MGAT3Q09327 533 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 MXD4Q14582 209 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-212ENST00000582122 PCBP1Q15365 356 aaKnown RBP eCLIP11.62□□□□□ -0.55
TOP3A-212ENST00000582122 SF3A1Q15459 793 aaKnown RBP11.62□□□□□ -0.55
TOP3A-212ENST00000582122 RAB30Q15771 203 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 FBXO47Q5MNV8 452 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 C16orf59Q7L2K0 433 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 OTOP2Q7RTS6 562 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 LINC01465Q8N7H1 131 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 SNX29Q8TEQ0 813 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 PSPC1Q8WXF1 523 aaKnown RBP11.62□□□□□ -0.55
TOP3A-212ENST00000582122 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
TOP3A-212ENST00000582122 WNT8BQ93098 351 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 CALML4Q96GE6 196 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-212ENST00000582122 IFIH1Q9BYX4 1025 aaKnown RBP11.62□□□□□ -0.55
TOP3A-212ENST00000582122 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 CFAP45Q9UL16 551 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 DNM3Q9UQ16 869 aa11.62□□□□□ -0.55
TOP3A-212ENST00000582122 ARHGEF35A5YM69 484 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 ZBBXA8MT70 800 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 SPATA31C1P0DKV0 1188 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 TXLNAP40222 546 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 RARRES1P49788 294 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 EPHB4P54760 987 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 PAK2Q13177 524 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 SLC39A14Q15043 492 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 C9orf50Q5SZB4 431 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 SCLT1Q96NL6 688 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 CEP89Q96ST8 783 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 MTRQ99707 1265 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 TIPINQ9BVW5 301 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 GCOM2Q9BZD3 368 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-212ENST00000582122 ATP6V0A4Q9HBG4 840 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 PRDM6Q9NQX0 595 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 KCND2Q9NZV8 630 aa11.61□□□□□ -0.55
TOP3A-212ENST00000582122 SUCLA2Q9P2R7 463 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-212ENST00000582122 SRPRBQ9Y5M8 271 aaKnown RBP11.61□□□□□ -0.55
TOP3A-212ENST00000582122 SPTBN5Q9NRC6 3674 aaKnown RBP11.6□□□□□ -0.55
TOP3A-212ENST00000582122 CDH23Q9H251 3354 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 GPR32O75388 356 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 MED24O75448 989 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 RPS6KA5O75582 802 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 YEATS4O95619 227 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 F13A1P00488 732 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 AMHP03971 560 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 GHRP10912 638 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 FOSL2P15408 326 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
TOP3A-212ENST00000582122 EIF4BP23588 611 aaKnown RBP11.6□□□□□ -0.55
TOP3A-212ENST00000582122 NASPP49321 788 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-212ENST00000582122 GPC3P51654 580 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 CLCN3P51790 818 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 NPEPPSP55786 919 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 NLRP11P59045 1033 aaKnown RBP11.6□□□□□ -0.55
TOP3A-212ENST00000582122 POU5F1BQ06416 359 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 TFDP1Q14186 410 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 LPIN1Q14693 890 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 MBTPS1Q14703 1052 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 EMC2Q15006 297 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 HYIQ5T013 277 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 PLA2G4FQ68DD2 849 aa11.6□□□□□ -0.55
TOP3A-212ENST00000582122 LRRC71Q8N4P6 559 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms