RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 METTL13Q8N6R0 699 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 MAFAQ8NHW3 353 aaPredicted RBP13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 HSD17B14Q9BPX1 270 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 SH2D3AQ9BRG2 576 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 ZBED2Q9BTP6 218 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 CERS4Q9HA82 394 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 UPF2Q9HAU5 1272 aaKnown RBP13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 ERVK-5Q9HDB9 667 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 RGL1Q9NZL6 768 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 NLRC5Q86WI3 1866 aa13.92□□□□□ -0.18
SMARCD2-209ENST00000581832 M0QZ92 97 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 MGEA5O60502 916 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 SLITRK3O94933 977 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 CRYBB1P53674 252 aaPredicted RBP13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 ERVK-21P61565 698 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 CALCRLQ16602 461 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 TMEM266Q2M3C6 531 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 C4orf19Q8IY42 314 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 ZNF689Q96CS4 500 aaPredicted RBP13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 OSMRQ99650 979 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 FTHL17Q9BXU8 183 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 PCDHA12Q9UN75 941 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 TTC28Q96AY4 2481 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 NCOR1O75376 2440 aa13.91□□□□□ -0.18
SMARCD2-209ENST00000581832 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 ZBTB39O15060 712 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 NEMFO60524 1076 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 UPP2O95045 317 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 TOB1P50616 345 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 GPC3P51654 580 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 NPEPPSP55786 919 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 NLRP11P59045 1033 aaKnown RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 TBC1D8BQ0IIM8 1120 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 SAFBQ15424 915 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 MTERF2Q49AM1 385 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 FAM228AQ86W67 206 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 NOSTRINQ8IVI9 506 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 C4orf32Q8N8J7 132 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 FAM184AQ8NB25 1140 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 ARNTL2Q8WYA1 636 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 DYDC2Q96IM9 177 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 PPP1R16BQ96T49 567 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 GAS2L1Q99501 681 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 EIF2AK1Q9BQI3 630 aaKnown RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 LXNQ9BS40 222 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 SUGCTQ9HAC7 445 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 ST3GAL5Q9UNP4 418 aa13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 FNDC1Q4ZHG4 1894 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-209ENST00000581832 RALGAPA2Q2PPJ7 1873 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 COL4A4P53420 1690 aaPredicted RBP13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 RPS6KA5O75582 802 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 LYPLA2O95372 231 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 TMOD1P28289 359 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 MCM7P33993 719 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 TXKP42681 527 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 MCM2P49736 904 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 PAK2Q13177 524 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 CTTNQ14247 550 aaKnown RBP13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 DSC3Q14574 896 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 ZNF710Q8N1W2 664 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 TGS1Q96RS0 853 aaKnown RBP13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 DHX33Q9H6R0 707 aaKnown RBP13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 AKT3Q9Y243 479 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 MTCH2Q9Y6C9 303 aa13.89□□□□□ -0.19
SMARCD2-209ENST00000581832 GPR182O15218 404 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 DGKIO75912 1065 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 SPATA31C1P0DKV0 1188 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 ATP2B1P20020 1258 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 EIF4BP23588 611 aaKnown RBP13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 YWHABP31946 246 aaKnown RBP13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 FAM189BP81408 668 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 CYP4A11Q02928 519 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 GRB10Q13322 594 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 ORC2Q13416 577 aaPredicted RBP13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 ZNF174Q15697 407 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 SLC17A8Q8NDX2 589 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 ZNF668Q96K58 619 aaPredicted RBP13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 MAP7D2Q96T17 732 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 C17orf80Q9BSJ5 609 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 ZSWIM4Q9H7M6 989 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 RGS18Q9NS28 235 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 ATG2AQ2TAZ0 1938 aa13.88□□□□□ -0.19
SMARCD2-209ENST00000581832 POTEMA6NI47 508 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 C9IYK1 514 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms