RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 DDAH1O94760 285 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 ATG7O95352 703 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 PLEKHA8P1O95397 391 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 WEE2P0C1S8 567 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 PBX3P40426 434 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 CRYBB1P53674 252 aaPredicted RBP14.54□□□□□ -0.08
SS18-219ENST00000581570 DSC3Q14574 896 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 FAM228AQ86W67 206 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 ZDHHC14Q8IZN3 488 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 ABI1Q8IZP0 508 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 SRBD1Q8N5C6 995 aaKnown RBP14.54□□□□□ -0.08
SS18-219ENST00000581570 TDRD5Q8NAT2 981 aaKnown RBP14.54□□□□□ -0.08
SS18-219ENST00000581570 CYP2W1Q8TAV3 490 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 PPP1R16BQ96T49 567 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 OSMRQ99650 979 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 RWDD1Q9H446 243 aaPredicted RBP14.54□□□□□ -0.08
SS18-219ENST00000581570 TAF6LQ9Y6J9 622 aa14.54□□□□□ -0.08
SS18-219ENST00000581570 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 BACH1O14867 736 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 CLASP2O75122 1294 aaKnown RBP14.53□□□□□ -0.08
SS18-219ENST00000581570 ARP10275 920 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 CA8P35219 290 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 ANTXR2P58335 489 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 NUCB1Q02818 461 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 PTH1RQ03431 593 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 KIZQ2M2Z5 673 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 ZNF484Q5JVG2 852 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 ATAT1Q5SQI0 421 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 RARS2Q5T160 578 aaKnown RBP14.53□□□□□ -0.08
SS18-219ENST00000581570 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
SS18-219ENST00000581570 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 C12orf76Q8N812 135 aaPredicted RBP14.53□□□□□ -0.08
SS18-219ENST00000581570 FLCNQ8NFG4 579 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 RNF19AQ9NV58 838 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 DBR1Q9UK59 544 aaKnown RBP14.53□□□□□ -0.08
SS18-219ENST00000581570 MYO15AQ9UKN7 3530 aa14.53□□□□□ -0.08
SS18-219ENST00000581570 IGKV6D-21A0A0A0MT36 114 aa14.52□□□□□ -0.09
SS18-219ENST00000581570 CXCL14O95715 111 aa14.52□□□□□ -0.09
SS18-219ENST00000581570 ITGB3BPQ13352 177 aaPredicted RBP14.52□□□□□ -0.09
SS18-219ENST00000581570 BMS1Q14692 1282 aaKnown RBP14.52□□□□□ -0.09
SS18-219ENST00000581570 FAM160B1Q5W0V3 765 aa14.52□□□□□ -0.09
SS18-219ENST00000581570 CWF19L1Q69YN2 538 aaKnown RBP14.52□□□□□ -0.09
SS18-219ENST00000581570 LY9Q9HBG7 655 aa14.52□□□□□ -0.09
SS18-219ENST00000581570 AGO4Q9HCK5 861 aaKnown RBP14.52□□□□□ -0.09
SS18-219ENST00000581570 USTQ9Y2C2 406 aa14.52□□□□□ -0.09
SS18-219ENST00000581570 COL1A2P08123 1366 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 FNDC1Q4ZHG4 1894 aaPredicted RBP14.51□□□□□ -0.09
SS18-219ENST00000581570 hCG_1642624A0A1W2PR95 340 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 PI15O43692 258 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 VTNP04004 478 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 ZSCAN20P17040 1043 aaPredicted RBP14.51□□□□□ -0.09
SS18-219ENST00000581570 AOC1P19801 751 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 CEP55Q53EZ4 464 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 KIAA1841Q6NSI8 718 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 KANK3Q6NY19 840 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 PDXDC2PQ6P474 469 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 ABHD15Q6UXT9 468 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 ECHDC2Q86YB7 292 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 MB21D2Q8IYB1 491 aaPredicted RBP14.51□□□□□ -0.09
SS18-219ENST00000581570 SLC39A11Q8N1S5 342 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 TMEM87AQ8NBN3 555 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 CYP26B1Q9NR63 512 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 DZANK1Q9NVP4 752 aa14.51□□□□□ -0.09
SS18-219ENST00000581570 ZBTB42B2RXF5 422 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 DDX39AO00148 427 aaKnown RBP14.5□□□□□ -0.09
SS18-219ENST00000581570 GPR32O75388 356 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 EOMESO95936 686 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 CCNE2O96020 404 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 ANGPT1Q15389 498 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 CASC1Q6TDU7 716 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 HEATR3Q7Z4Q2 680 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 CCDC60Q8IWA6 550 aaPredicted RBP14.5□□□□□ -0.09
SS18-219ENST00000581570 CCDC105Q8IYK2 499 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 CCDC82Q8N4S0 544 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 METTL13Q8N6R0 699 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 RNF169Q8NCN4 708 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 RTP3Q9BQQ7 232 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 ZNF302Q9NR11 478 aa14.5□□□□□ -0.09
SS18-219ENST00000581570 CCDC69A6NI79 296 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 NT5C1B-RDH14C9J2C7 533 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 MEIS1O00470 390 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 C22orf31O95567 290 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 IGHDP01880 384 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 NPR3P17342 541 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 RXRAP19793 462 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 ALDH7A1P49419 539 aaKnown RBP14.49□□□□□ -0.09
SS18-219ENST00000581570 METAP2P50579 478 aaKnown RBP eCLIP14.49□□□□□ -0.09
SS18-219ENST00000581570 CLLU1OSQ5K130 101 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 SWSAP1Q6NVH7 229 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 CKAP2LQ8IYA6 745 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 TMTC2Q8N394 836 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 DTWD2Q8NBA8 298 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 KCNG4Q8TDN1 519 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 RUFY2Q8WXA3 655 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 ACSF2Q96CM8 615 aaPredicted RBP14.49□□□□□ -0.09
SS18-219ENST00000581570 TMEM169Q96HH4 297 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 PGBD1Q96JS3 809 aa14.49□□□□□ -0.09
SS18-219ENST00000581570 LOXHD1Q8IVV2 1947 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms