RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 Q6ZUG5 572 aa6.12□□□□□ -1.43
NF1-220ENST00000581113 DDX42Q86XP3 938 aaKnown RBP eCLIP6.12□□□□□ -1.43
NF1-220ENST00000581113 ZDHHC14Q8IZN3 488 aa6.12□□□□□ -1.43
NF1-220ENST00000581113 KCNC2Q96PR1 638 aa6.12□□□□□ -1.43
NF1-220ENST00000581113 MYL10Q9BUA6 226 aa6.12□□□□□ -1.43
NF1-220ENST00000581113 SEMA4AQ9H3S1 761 aa6.12□□□□□ -1.43
NF1-220ENST00000581113 USP36Q9P275 1121 aaKnown RBP6.12□□□□□ -1.43
NF1-220ENST00000581113 COL4A3BPQ9Y5P4 624 aa6.12□□□□□ -1.43
NF1-220ENST00000581113 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 GPR39O43194 453 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 NOBOXO60393 691 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 PRPF6O94906 941 aaKnown RBP6.11□□□□□ -1.43
NF1-220ENST00000581113 HMGCRP04035 888 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 AMPD3Q01432 767 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 KIAA2012Q0VF49 1180 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 MAP3K12Q12852 859 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 NOLC1Q14978 699 aaKnown RBP eCLIP6.11□□□□□ -1.43
NF1-220ENST00000581113 GRAMD4Q6IC98 578 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 ESPNLQ6ZVH7 1005 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 GPR155Q7Z3F1 870 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 CLRN3Q8NCR9 226 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 RPGRQ92834 1020 aaKnown RBP6.11□□□□□ -1.43
NF1-220ENST00000581113 FBXO10Q9UK96 956 aa6.11□□□□□ -1.43
NF1-220ENST00000581113 TTBK1Q5TCY1 1321 aaPredicted RBP6.11□□□□□ -1.43
NF1-220ENST00000581113 A0A0G2JNJ9 132 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 CUTAO60888 179 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 SESN3P58005 492 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 TOP3AQ13472 1001 aaPredicted RBP6.1□□□□□ -1.43
NF1-220ENST00000581113 PTPROQ16827 1216 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 UNQ6494/PRO21346Q6UXR6 183 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 FRMD7Q6ZUT3 714 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 RASSF3Q86WH2 238 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 SPATS2Q86XZ4 545 aaKnown RBP6.1□□□□□ -1.43
NF1-220ENST00000581113 IFNL2Q8IZJ0 200 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 KLHL36Q8N4N3 616 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 ZCRB1Q8TBF4 217 aaKnown RBP6.1□□□□□ -1.43
NF1-220ENST00000581113 FERMT2Q96AC1 680 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 ZDHHC5Q9C0B5 715 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 PARD6AQ9NPB6 346 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 PCDH12Q9NPG4 1184 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 Q9UFV3 132 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 MAGEL2Q9UJ55 1249 aa6.1□□□□□ -1.43
NF1-220ENST00000581113 ST20-MTHFSA0A0A6YYL1 179 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 OTOL1A6NHN0 477 aaPredicted RBP6.09□□□□□ -1.43
NF1-220ENST00000581113 ELL2O00472 640 aaPredicted RBP6.09□□□□□ -1.43
NF1-220ENST00000581113 RRADP55042 308 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 BCAR1P56945 870 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 FZD5Q13467 585 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 RNF219Q5W0B1 726 aaPredicted RBP6.09□□□□□ -1.43
NF1-220ENST00000581113 KIAA1841Q6NSI8 718 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 SPOCD1Q6ZMY3 1216 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 REXO1L1PQ8IX06 675 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 COG1Q8WTW3 980 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 KATNBL1Q9H079 304 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 TOPORSQ9NS56 1045 aaPredicted RBP6.09□□□□□ -1.43
NF1-220ENST00000581113 ADAM29Q9UKF5 820 aa6.09□□□□□ -1.43
NF1-220ENST00000581113 INHBBP09529 407 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 ZNF888P0CJ79 500 aaPredicted RBP6.09□□□□□ -1.44
NF1-220ENST00000581113 IBSPP21815 317 aaPredicted RBP6.09□□□□□ -1.44
NF1-220ENST00000581113 ETV4P43268 484 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 STAT5BP51692 787 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 TMEM200BQ69YZ2 307 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 RALYLQ86SE5 291 aaKnown RBP6.09□□□□□ -1.44
NF1-220ENST00000581113 CXorf67Q86X51 503 aaPredicted RBP6.09□□□□□ -1.44
NF1-220ENST00000581113 KBTBD2Q8IY47 623 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 OR5AN1Q8NGI8 311 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 MBD6Q96DN6 1003 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 GPATCH3Q96I76 525 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 AJUBAQ96IF1 538 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 CARD11Q9BXL7 1154 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 ANO3Q9BYT9 981 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 MTG2Q9H4K7 406 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 VTA1Q9NP79 307 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 KCMF1Q9P0J7 381 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 KCNG1Q9UIX4 513 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 PTPN22Q9Y2R2 807 aa6.09□□□□□ -1.44
NF1-220ENST00000581113 PCDH8O95206 1070 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 CLEC2LP0C7M8 214 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 CDK11BP21127 795 aaKnown RBP6.08□□□□□ -1.44
NF1-220ENST00000581113 CSF2RBP32927 897 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 CDKN1CP49918 316 aaPredicted RBP6.08□□□□□ -1.44
NF1-220ENST00000581113 USP10Q14694 798 aaKnown RBP6.08□□□□□ -1.44
NF1-220ENST00000581113 EIF4HQ15056 248 aaKnown RBP6.08□□□□□ -1.44
NF1-220ENST00000581113 DGKDQ16760 1214 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 ZBTB41Q5SVQ8 909 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 KANSL1Q7Z3B3 1105 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 RTKN2Q8IZC4 609 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 ADAM7Q9H2U9 754 aa6.08□□□□□ -1.44
NF1-220ENST00000581113 MAFGO15525 162 aa6.07□□□□□ -1.44
NF1-220ENST00000581113 B4GALT3O60512 393 aa6.07□□□□□ -1.44
NF1-220ENST00000581113 B4GALT4O60513 344 aa6.07□□□□□ -1.44
NF1-220ENST00000581113 PRKD3O94806 890 aa6.07□□□□□ -1.44
NF1-220ENST00000581113 NCLP19338 710 aaKnown RBP6.07□□□□□ -1.44
NF1-220ENST00000581113 MEOX1P50221 254 aa6.07□□□□□ -1.44
NF1-220ENST00000581113 FAM50AQ14320 339 aaKnown RBP6.07□□□□□ -1.44
NF1-220ENST00000581113 PDCD1Q15116 288 aa6.07□□□□□ -1.44
NF1-220ENST00000581113 LGI4Q8N135 537 aa6.07□□□□□ -1.44
NF1-220ENST00000581113 PRPF38AQ8NAV1 312 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms