RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 CTCFP49711 727 aaPredicted RBP15.38■□□□□ 0.05
TSEN54-206ENST00000579449 EHHADHQ08426 723 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 MAPK7Q13164 816 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 HERC4Q5GLZ8 1057 aaPredicted RBP15.38■□□□□ 0.05
TSEN54-206ENST00000579449 GNASQ5JWF2 1037 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 ZNF658Q5TYW1 1059 aaPredicted RBP15.38■□□□□ 0.05
TSEN54-206ENST00000579449 CTU1Q7Z7A3 348 aaKnown RBP15.38■□□□□ 0.05
TSEN54-206ENST00000579449 SMYD4Q8IYR2 804 aaPredicted RBP15.38■□□□□ 0.05
TSEN54-206ENST00000579449 KAT2BQ92831 832 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 HPS3Q969F9 1004 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 ATP6V0A4Q9HBG4 840 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 GDAQ9Y2T3 454 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 PPME1Q9Y570 386 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 COL4A3BPQ9Y5P4 624 aa15.38■□□□□ 0.05
TSEN54-206ENST00000579449 HTTP42858 3142 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 ZEB2O60315 1214 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 MSCO60682 206 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 KPNA6O60684 536 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 F2P00734 622 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 GAP43P17677 238 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 RFC5P40937 340 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 PSEN2P49810 448 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 ZNF131P52739 623 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 POLGP54098 1239 aaPredicted RBP15.37■□□□□ 0.05
TSEN54-206ENST00000579449 PSMD2Q13200 908 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 MFSD10Q14728 455 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 EMC2Q15006 297 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 SLC9C1Q4G0N8 1177 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 ZNF484Q5JVG2 852 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 FAM102BQ5T8I3 360 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 SFR1Q86XK3 245 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 DAW1Q8N136 415 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 MLKLQ8NB16 471 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 KLHDC9Q8NEP7 349 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 DHX33Q9H6R0 707 aaKnown RBP15.37■□□□□ 0.05
TSEN54-206ENST00000579449 SLC39A2Q9NP94 309 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 GPRC5CQ9NQ84 441 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 XPNPEP1Q9NQW7 623 aa15.37■□□□□ 0.05
TSEN54-206ENST00000579449 TRIP12Q14669 1992 aaPredicted RBP15.36■□□□□ 0.05
TSEN54-206ENST00000579449 HAS3O00219 553 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 INSRRP14616 1297 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
TSEN54-206ENST00000579449 SOX10P56693 466 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 PURAQ00577 322 aaKnown RBP15.36■□□□□ 0.05
TSEN54-206ENST00000579449 TBC1D8BQ0IIM8 1120 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 STK4Q13043 487 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 FAM26FQ5R3K3 315 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 LHX8Q68G74 356 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 MYCT1Q8N699 235 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 KIAA0895Q8NCT3 520 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 MCPH1Q8NEM0 835 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 TRAPPC12Q8WVT3 735 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 DRC1Q96MC2 740 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 GTPBP4Q9BZE4 634 aaKnown RBP15.36■□□□□ 0.05
TSEN54-206ENST00000579449 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.05
TSEN54-206ENST00000579449 PARVGQ9HBI0 331 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 TBC1D7Q9P0N9 293 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 PCDHA2Q9Y5H9 948 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 SCN10AQ9Y5Y9 1956 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 COL1A2P08123 1366 aa15.36■□□□□ 0.05
TSEN54-206ENST00000579449 PPP1R3GB7ZBB8 358 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 MAFO75444 373 aaPredicted RBP15.35■□□□□ 0.05
TSEN54-206ENST00000579449 CST5P28325 142 aaPredicted RBP15.35■□□□□ 0.05
TSEN54-206ENST00000579449 PRCPP42785 496 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 CHMP4BP1P59074 171 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 IGBP1P78318 339 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 PPFIA1Q13136 1202 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 KCNA10Q16322 511 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 KIAA0753Q2KHM9 967 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 EXOC8Q8IYI6 725 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 SLC7A3Q8WY07 619 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 KIFAP3Q92845 792 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 MTG1Q9BT17 334 aaPredicted RBP15.35■□□□□ 0.05
TSEN54-206ENST00000579449 KATNAL1Q9BW62 490 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 UNC93B1Q9H1C4 597 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 RBSNQ9H1K0 784 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 SEL1LQ9UBV2 794 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 DACH1Q9UI36 760 aa15.35■□□□□ 0.05
TSEN54-206ENST00000579449 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 PLS3P13797 630 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 ZNF165P49910 485 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 GSE1Q14687 1217 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 LRRC41Q15345 812 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 GRIK4Q16099 956 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 ODR4Q5SWX8 454 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 CCSAPQ6IQ19 270 aaPredicted RBP15.34■□□□□ 0.05
TSEN54-206ENST00000579449 FBXO46Q6PJ61 603 aaPredicted RBP15.34■□□□□ 0.05
TSEN54-206ENST00000579449 CXCL17Q6UXB2 119 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 RNF180Q86T96 592 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 GLIS3Q8NEA6 775 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 PPP1R13LQ8WUF5 828 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 TMEM143Q96AN5 459 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 FGFBP2Q9BYJ0 223 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 NAT10Q9H0A0 1025 aaKnown RBP15.34■□□□□ 0.05
TSEN54-206ENST00000579449 POLR3FQ9H1D9 316 aaPredicted RBP15.34■□□□□ 0.05
TSEN54-206ENST00000579449 CBX8Q9HC52 389 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 OLFML3Q9NRN5 406 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 MAPK8IP1Q9UQF2 711 aa15.34■□□□□ 0.05
TSEN54-206ENST00000579449 CENPFP49454 3210 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms