RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 FGFR1P11362 822 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SFNP31947 248 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 GTF2F1P35269 517 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 JAK3P52333 1124 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 HYAL1Q12794 435 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 UGCGQ16739 394 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PUS10Q3MIT2 529 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FAM102BQ5T8I3 360 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SLC24A5Q71RS6 500 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 MIER3Q7Z3K6 550 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 BLIDQ8IZY5 108 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 GJD3Q8N144 294 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 KLHL23Q8NBE8 558 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 POF1BQ8WVV4 589 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 KHSRPQ92945 711 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PPP2R3CQ969Q6 453 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 RIT2Q99578 217 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CD320Q9NPF0 282 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 RGS18Q9NS28 235 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 C1orf112Q9NSG2 853 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SEPT9Q9UHD8 586 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 KCNJ14Q9UNX9 436 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FAM50BQ9Y247 325 aa10.39□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FAM86C2PA6NEL3 165 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LINC01565O15544 149 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NCK2O43639 380 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 EDIL3O43854 480 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ZNF862O60290 1169 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DTNBO60941 627 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CDKL5O76039 1030 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ITGB1P05556 798 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DNAJB1P25685 340 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 IRS1P35568 1242 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NDUFV1P49821 464 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TBC1D8BQ0IIM8 1120 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NONOQ15233 471 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LETM2Q2VYF4 491 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 Q4G0T1 1027 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 RBM23Q86U06 439 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FAM178BQ8IXR5 827 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 RNF169Q8NCN4 708 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 MICAL1Q8TDZ2 1067 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NLRP7Q8WX94 980 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SLC5A5Q92911 643 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 P2RX5Q93086 422 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SH2D3AQ9BRG2 576 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TM6SF1Q9BZW5 370 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SLKQ9H2G2 1235 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ATP6V0A4Q9HBG4 840 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PCDHB12Q9Y5F1 795 aa10.38□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TMEM150BA6NC51 233 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 C9IYK1 514 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PSMD10O75832 226 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 XBP1P17861 261 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FGFR4P22455 802 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NRIP1P48552 1158 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DLX2Q07687 328 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SCRN1Q12765 414 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CAMK1Q14012 370 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 INF2Q27J81 1249 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NAALADL2Q58DX5 795 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TMEM31Q5JXX7 168 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 KRT25Q7Z3Z0 450 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ADGRD2Q7Z7M1 963 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 THNSL1Q8IYQ7 743 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ABI1Q8IZP0 508 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SPPL3Q8TCT6 385 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 AAASQ9NRG9 546 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TMEM161AQ9NX61 479 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DDX25Q9UHL0 483 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PCDHGC5Q9Y5F6 944 aa10.37□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CCDC194A0A1B0GVG4 234 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 M0R2N6 131 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SLC37A4O43826 429 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 MARCH6O60337 910 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TBX10O75333 385 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CSDE1O75534 798 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 EIF4BP23588 611 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LTBRP36941 435 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 GPC3P51654 580 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 GALNT17Q6IS24 598 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 COLGALT1Q8NBJ5 622 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DAGLBQ8NCG7 672 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 RDM1Q8NG50 284 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LRFN3Q9BTN0 628 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ADAMTS10Q9H324 1103 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TYW1Q9NV66 732 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LOXHD1Q8IVV2 1947 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TTC3P53804 2025 aa10.36□□□□□ -0.75
CDK5RAP3-211ENST00000578996 KIAA1671Q9BY89 1806 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CYP3A7-CYP3A51PA0A087WV96 503 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PER2O15055 1255 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 HOXA2O43364 376 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms