RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ATP6V0A4Q9HBG4 840 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 WRAP73Q9P2S5 460 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 HDAC6Q9UBN7 1215 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TUBE1Q9UJT0 475 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TANC1Q9C0D5 1861 aa12.54□□□□□ -0.4
CDK5RAP3-210ENST00000578733 DCDC2CA8MYV0 355 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MYL1P05976 194 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SLFN14P0C7P3 912 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PTGISQ16647 500 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PADI6Q6TGC4 694 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MTHFD1LQ6UB35 978 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SLC43A3Q8NBI5 491 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MAP7D2Q96T17 732 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 LMBRD1Q9NUN5 540 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SETD4Q9NVD3 440 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
CDK5RAP3-210ENST00000578733 USO1O60763 962 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ZNF202O95125 648 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 STBD1O95210 358 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CYP2C9P11712 490 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 KLRC1P26715 233 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 NPEPPSP55786 919 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CDC42EP1Q00587 391 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 DHX8Q14562 1220 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 MCM6Q14566 821 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 EMC2Q15006 297 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 E2F4Q16254 413 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 KRBA2Q6ZNG9 492 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 METTL13Q8N6R0 699 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 DIS3LQ8TF46 1054 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CCDC47Q96A33 483 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 TOX2Q96NM4 488 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 GOLPH3LQ9H4A5 285 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 BLOC1S4Q9NUP1 217 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SERTAD1Q9UHV2 236 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SMIM35A0A1B0GVV1 85 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 TMEM150BA6NC51 233 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 M0QZ92 97 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ZBTB39O15060 712 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ASAP2O43150 1006 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 TBCAO75347 108 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 C22orf31O95567 290 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CYP11B2P19099 503 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 HOXC8P31273 242 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CDK7P50613 346 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 PTK7Q13308 1070 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SNX17Q15036 470 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SKOR2Q2VWA4 1001 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 NAALADL2Q58DX5 795 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 IER5Q5VY09 327 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 EFCAB12Q6NXP0 572 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 KCNK18Q7Z418 384 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 FMR1NBQ8N0W7 255 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 NME8Q8N427 588 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 TRAPPC12Q8WVT3 735 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 KIFAP3Q92845 792 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 DHX33Q9H6R0 707 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SUGCTQ9HAC7 445 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ODF2LQ9ULJ1 636 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ATP11BQ9Y2G3 1177 aa12.51□□□□□ -0.41
CDK5RAP3-210ENST00000578733 LAMA3Q16787 3333 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 A0A087WWV3 80 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 A0A087X0B3 334 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 MBLAC1A4D2B0 266 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 TREHO43280 583 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 EVI5O60447 810 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 PQBP1O60828 265 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CAND2O75155 1236 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 GUCY2CP25092 1073 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 RTP1P59025 263 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 BFSP2Q13515 415 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 TFDP1Q14186 410 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 MXD4Q14582 209 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 PPP2R5AQ15172 486 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 LONRF3Q496Y0 759 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 FAM102BQ5T8I3 360 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 ANKRD33Q7Z3H0 272 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 CAGE1Q8TC20 777 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 PSPC1Q8WXF1 523 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SYAP1Q96A49 352 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 IFT74Q96LB3 600 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 SH2D3AQ9BRG2 576 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
CDK5RAP3-210ENST00000578733 KBTBD4Q9NVX7 518 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms