RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 PCDHB7Q9Y5E2 793 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-215ENST00000576958 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 DENND3A2RUS2 1198 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 HIDE1A8MVS5 230 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 MSH4O15457 936 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 CDC45O75419 566 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 FGF18O76093 207 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 STAG3L1P0CL83 205 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 ALADP13716 330 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
PRPF8-215ENST00000576958 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 IER5LQ5T953 404 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 RNF20Q5VTR2 975 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 PLPP4Q5VZY2 271 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 FAM160B1Q5W0V3 765 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 NIPA1Q7RTP0 329 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 EFHBQ8N7U6 833 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 SMRP1Q8NCR6 262 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 ZMYND12Q9H0C1 365 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 ADAMTS10Q9H324 1103 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 PRKAG3Q9UGI9 489 aa13.65□□□□□ -0.22
PRPF8-215ENST00000576958 FSCN2O14926 492 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 EYA4O95677 639 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 NLRP11P59045 1033 aaKnown RBP13.64□□□□□ -0.23
PRPF8-215ENST00000576958 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 CLLU1OSQ5K130 101 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 KANK3Q6NY19 840 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 REXO1Q8N1G1 1221 aaKnown RBP13.64□□□□□ -0.23
PRPF8-215ENST00000576958 NME8Q8N427 588 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 MICAL1Q8TDZ2 1067 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 KCNB2Q92953 911 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 CASD1Q96PB1 797 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 SLC26A6Q9BXS9 759 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 TLE6Q9H808 572 aa13.64□□□□□ -0.23
PRPF8-215ENST00000576958 PIEZO1Q92508 2521 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 COL1A2P08123 1366 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 MEIS3P2A8K0S8 358 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 PRPF3O43395 683 aaKnown RBP13.63□□□□□ -0.23
PRPF8-215ENST00000576958 TDP2O95551 362 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 ATF7P17544 494 aaPredicted RBP13.63□□□□□ -0.23
PRPF8-215ENST00000576958 HSPA4P34932 840 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 CRYBB1P53674 252 aaPredicted RBP13.63□□□□□ -0.23
PRPF8-215ENST00000576958 FAM189BP81408 668 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 PRKCEQ02156 737 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 NHLH1Q02575 133 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 HERC4Q5GLZ8 1057 aaPredicted RBP13.63□□□□□ -0.23
PRPF8-215ENST00000576958 EFCAB12Q6NXP0 572 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 SLC24A5Q71RS6 500 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
PRPF8-215ENST00000576958 RPGRIP1Q96KN7 1286 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 TLR9Q9NR96 1032 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 AKT3Q9Y243 479 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
PRPF8-215ENST00000576958 NID2Q14112 1375 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 LOC730098B7Z3J9 87 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 NT5C1B-RDH14C9J2C7 533 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 B4GALT3O60512 393 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 STBD1O95210 358 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 RPS6KB1P23443 525 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 SLC26A2P50443 739 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 FGD1P98174 961 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 COASYQ13057 564 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-215ENST00000576958 DUSP6Q16828 381 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 ZNF746Q6NUN9 644 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-215ENST00000576958 CENPQQ7L2Z9 268 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-215ENST00000576958 TMEM173Q86WV6 379 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-215ENST00000576958 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-215ENST00000576958 PRSS33Q8NF86 280 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 SAMM50Q9Y512 469 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 PCDHA10Q9Y5I2 948 aa13.62□□□□□ -0.23
PRPF8-215ENST00000576958 NCK2O43639 380 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 PDGFBP01127 241 aaPredicted RBP13.61□□□□□ -0.23
PRPF8-215ENST00000576958 OATP04181 439 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 PSAPP07602 524 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
PRPF8-215ENST00000576958 CIITAP33076 1130 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 KCNC3Q14003 757 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 NPY5RQ15761 445 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 SYCE2Q6PIF2 218 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 KSR1Q8IVT5 923 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
PRPF8-215ENST00000576958 HELQQ8TDG4 1101 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 BCL7CQ8WUZ0 217 aaPredicted RBP13.61□□□□□ -0.23
PRPF8-215ENST00000576958 AUTS2Q8WXX7 1259 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 LPPQ93052 612 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 CEP89Q96ST8 783 aa13.61□□□□□ -0.23
PRPF8-215ENST00000576958 S1PR5Q9H228 398 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms