RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PDCP20941 246 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 YWHABP31946 246 aaKnown RBP26.3■■□□□ 1.8
SNF8-217ENST00000576353 TOB1P50616 345 aaPredicted RBP26.3■■□□□ 1.8
SNF8-217ENST00000576353 CDC42EP1Q00587 391 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 KIZQ2M2Z5 673 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 RILPL1Q5EBL4 403 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 PPP2R2DQ66LE6 453 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 TMCO2Q7Z6W1 182 aaPredicted RBP26.3■■□□□ 1.8
SNF8-217ENST00000576353 CEP170P1Q96L14 293 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 CDX2Q99626 313 aaPredicted RBP26.3■■□□□ 1.8
SNF8-217ENST00000576353 SH2D3AQ9BRG2 576 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 CDHR5Q9HBB8 845 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 PADI3Q9ULW8 664 aa26.3■■□□□ 1.8
SNF8-217ENST00000576353 IGKV6-21A0A0C4DH24 114 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.29■■□□□ 1.8
SNF8-217ENST00000576353 RBAK-RBAKDNI3L0D1 243 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 K7ELQ4 463 aaPredicted RBP26.29■■□□□ 1.8
SNF8-217ENST00000576353 MAFO75444 373 aaPredicted RBP26.29■■□□□ 1.8
SNF8-217ENST00000576353 RPS6KA5O75582 802 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 LYPLA2O95372 231 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 CA3P07451 260 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 TECP42680 631 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 GRIN2CQ14957 1233 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 TMEM266Q2M3C6 531 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 PLA2G4FQ68DD2 849 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 SLC7A3Q8WY07 619 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 TOP1MTQ969P6 601 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 INTS4Q96HW7 963 aaKnown RBP26.29■■□□□ 1.8
SNF8-217ENST00000576353 STXBP5LQ9Y2K9 1186 aa26.29■■□□□ 1.8
SNF8-217ENST00000576353 ENPP3O14638 875 aa26.28■■□□□ 1.8
SNF8-217ENST00000576353 NPEPPSP55786 919 aa26.28■■□□□ 1.8
SNF8-217ENST00000576353 NLRP11P59045 1033 aaKnown RBP26.28■■□□□ 1.8
SNF8-217ENST00000576353 NBR1Q14596 966 aa26.28■■□□□ 1.8
SNF8-217ENST00000576353 FAM117BQ6P1L5 589 aa26.28■■□□□ 1.8
SNF8-217ENST00000576353 C4orf32Q8N8J7 132 aa26.28■■□□□ 1.8
SNF8-217ENST00000576353 PPP1R16BQ96T49 567 aa26.28■■□□□ 1.8
SNF8-217ENST00000576353 PCDHB6Q9Y5E3 794 aa26.28■■□□□ 1.8
SNF8-217ENST00000576353 POTEMA6NI47 508 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 LAD1O00515 517 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 GPR182O15218 404 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 RFC5P40937 340 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 NFX1Q12986 1120 aaKnown RBP26.27■■□□□ 1.8
SNF8-217ENST00000576353 PTGDRQ13258 359 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 XKR9Q5GH70 373 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 ERMNQ8TAM6 284 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 SNX21Q969T3 373 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 OSMRQ99650 979 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 ADAMTS10Q9H324 1103 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 NOC2LQ9Y3T9 749 aaKnown RBP26.27■■□□□ 1.8
SNF8-217ENST00000576353 INSL6Q9Y581 213 aa26.27■■□□□ 1.8
SNF8-217ENST00000576353 POLGP54098 1239 aaPredicted RBP26.26■■□□□ 1.79
SNF8-217ENST00000576353 TMEM40Q8WWA1 233 aa26.26■■□□□ 1.79
SNF8-217ENST00000576353 SCLT1Q96NL6 688 aa26.26■■□□□ 1.79
SNF8-217ENST00000576353 TUFT1Q9NNX1 390 aa26.26■■□□□ 1.79
SNF8-217ENST00000576353 ANKEF1Q9NU02 776 aa26.26■■□□□ 1.79
SNF8-217ENST00000576353 SUCLA2Q9P2R7 463 aaPredicted RBP26.26■■□□□ 1.79
SNF8-217ENST00000576353 UPP2O95045 317 aa26.25■■□□□ 1.79
SNF8-217ENST00000576353 XRCC6P12956 609 aaKnown RBP eCLIP26.25■■□□□ 1.791e-6■■■■■ 27.1
SNF8-217ENST00000576353 FXR2P51116 673 aaKnown RBP eCLIP26.25■■□□□ 1.79
SNF8-217ENST00000576353 GPC3P51654 580 aa26.25■■□□□ 1.79
SNF8-217ENST00000576353 ZNF579Q8NAF0 562 aaKnown RBP26.25■■□□□ 1.79
SNF8-217ENST00000576353 RAB34Q9BZG1 259 aa26.25■■□□□ 1.79
SNF8-217ENST00000576353 DHX33Q9H6R0 707 aaKnown RBP26.25■■□□□ 1.79
SNF8-217ENST00000576353 ERVK-5Q9HDB9 667 aa26.25■■□□□ 1.79
SNF8-217ENST00000576353 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.25■■□□□ 1.79
SNF8-217ENST00000576353 ST3GAL5Q9UNP4 418 aa26.25■■□□□ 1.79
SNF8-217ENST00000576353 WDR81Q562E7 1941 aa26.24■■□□□ 1.79
SNF8-217ENST00000576353 ZBTB39O15060 712 aa26.24■■□□□ 1.79
SNF8-217ENST00000576353 GAS2O43903 313 aaKnown RBP26.24■■□□□ 1.79
SNF8-217ENST00000576353 EIF4BP23588 611 aaKnown RBP26.24■■□□□ 1.79
SNF8-217ENST00000576353 HTRA4P83105 476 aaPredicted RBP26.24■■□□□ 1.79
SNF8-217ENST00000576353 TAP1Q03518 808 aa26.24■■□□□ 1.79
SNF8-217ENST00000576353 DRP2Q13474 957 aa26.24■■□□□ 1.79
SNF8-217ENST00000576353 PDIA5Q14554 519 aa26.24■■□□□ 1.79
SNF8-217ENST00000576353 NLRP7Q8WX94 980 aa26.24■■□□□ 1.79
SNF8-217ENST00000576353 MYLIPQ8WY64 445 aa26.24■■□□□ 1.79
SNF8-217ENST00000576353 CCDC43Q96MW1 224 aaKnown RBP26.24■■□□□ 1.79
SNF8-217ENST00000576353 POLR3CQ9BUI4 534 aaPredicted RBP26.24■■□□□ 1.79
SNF8-217ENST00000576353 TSPYL2Q9H2G4 693 aaPredicted RBP26.24■■□□□ 1.79
SNF8-217ENST00000576353 SPATA31C1P0DKV0 1188 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 PRPHP41219 470 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 BRAPQ7Z569 592 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 RTN4RL1Q86UN2 441 aaPredicted RBP26.23■■□□□ 1.79
SNF8-217ENST00000576353 CATSPER3Q86XQ3 398 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 YME1L1Q96TA2 773 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 GCOM2Q9BZD3 368 aaPredicted RBP26.23■■□□□ 1.79
SNF8-217ENST00000576353 TMX1Q9H3N1 280 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 PRDM12Q9H4Q4 367 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 STK24Q9Y6E0 443 aa26.23■■□□□ 1.79
SNF8-217ENST00000576353 LCHNA4D1U4 455 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 DARSP14868 501 aaKnown RBP26.22■■□□□ 1.79
SNF8-217ENST00000576353 RPA1P27694 616 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 HAUS3Q68CZ6 603 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 ZNF410Q86VK4 478 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 FAM228AQ86W67 206 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 RHPN2Q8IUC4 686 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 TCP11Q8WWU5 503 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 NACC1Q96RE7 527 aa26.22■■□□□ 1.79
SNF8-217ENST00000576353 GAS2L1Q99501 681 aaPredicted RBP26.22■■□□□ 1.79
SNF8-217ENST00000576353 LRWD1Q9UFC0 647 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms