RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 HERC6Q8IVU3 1022 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 KIAA0319LQ8IZA0 1049 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 NME8Q8N427 588 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 PHOSPHO2Q8TCD6 241 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 APBB2Q92870 758 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 DYDC2Q96IM9 177 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 MTMR9Q96QG7 549 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 CELF4Q9BZC1 486 aaKnown RBP14.86□□□□□ -0.03
RPAIN-216ENST00000575599 SUGCTQ9HAC7 445 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 RGL1Q9NZL6 768 aa14.86□□□□□ -0.03
RPAIN-216ENST00000575599 DKC1O60832 514 aaKnown RBP eCLIP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 STBD1O95210 358 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 OR52Z1P0C646 297 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 TRAPPC10P48553 1259 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 CUL4AQ13619 759 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 CTTNQ14247 550 aaKnown RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 FAM117BQ6P1L5 589 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 TSHZ1Q6ZSZ6 1077 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 MYOCDQ8IZQ8 938 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 MAP7D2Q96T17 732 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 ZBED2Q9BTP6 218 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 NIFKQ9BYG3 293 aaKnown RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 SEMA6BQ9H3T3 888 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 MTMR10Q9NXD2 777 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 WRAP73Q9P2S5 460 aaPredicted RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 AKT3Q9Y243 479 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 PCDHA11Q9Y5I1 949 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 CDH23Q9H251 3354 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 LOXHD1Q8IVV2 1947 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 TMEM265A0A087WTH1 108 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 AMHP03971 560 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 TMOD1P28289 359 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 CD52P31358 61 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 PAK2Q13177 524 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 ORC2Q13416 577 aaPredicted RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 TARBP2Q15633 366 aaKnown RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 KIZQ2M2Z5 673 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 PPP2R2DQ66LE6 453 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 ANO5Q75V66 913 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 TPH2Q8IWU9 490 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 GUCD1Q96NT3 240 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 EIF2AK1Q9BQI3 630 aaKnown RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 ZNF576Q9H609 170 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 AGO3Q9H9G7 860 aaKnown RBP14.85□□□□□ -0.03
RPAIN-216ENST00000575599 SLC28A3Q9HAS3 691 aa14.85□□□□□ -0.03
RPAIN-216ENST00000575599 KDM3AQ9Y4C1 1321 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 TLL1O43897 1013 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 CA3P07451 260 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 YWHABP31946 246 aaKnown RBP14.84□□□□□ -0.03
RPAIN-216ENST00000575599 TECP42680 631 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 TOB1P50616 345 aaPredicted RBP14.84□□□□□ -0.03
RPAIN-216ENST00000575599 NPEPPSP55786 919 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 TMEM266Q2M3C6 531 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 C4orf19Q8IY42 314 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 ZNF668Q96K58 619 aaPredicted RBP14.84□□□□□ -0.03
RPAIN-216ENST00000575599 CEP170P1Q96L14 293 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 SCLT1Q96NL6 688 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 OSMRQ99650 979 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 ZSWIM4Q9H7M6 989 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 CDHR5Q9HBB8 845 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 CYP26B1Q9NR63 512 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 BMP2KQ9NSY1 1161 aaPredicted RBP14.84□□□□□ -0.03
RPAIN-216ENST00000575599 PCDHB6Q9Y5E3 794 aa14.84□□□□□ -0.03
RPAIN-216ENST00000575599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.83□□□□□ -0.04
RPAIN-216ENST00000575599 VPS37CA5D8V6 355 aaPredicted RBP14.83□□□□□ -0.04
RPAIN-216ENST00000575599 SLITRK3O94933 977 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 NFX1Q12986 1120 aaKnown RBP14.83□□□□□ -0.04
RPAIN-216ENST00000575599 DRP2Q13474 957 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 LINC01465Q8N7H1 131 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 USP38Q8NB14 1042 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 NEK9Q8TD19 979 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 TMEM40Q8WWA1 233 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 INTS4Q96HW7 963 aaKnown RBP14.83□□□□□ -0.04
RPAIN-216ENST00000575599 CEP89Q96ST8 783 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 PADI3Q9ULW8 664 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 SQORQ9Y6N5 450 aa14.83□□□□□ -0.04
RPAIN-216ENST00000575599 ZBTB39O15060 712 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 GPR32O75388 356 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 RPS6KA5O75582 802 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 UPP2O95045 317 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 GJB5O95377 273 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 CRYBB1P53674 252 aaPredicted RBP14.82□□□□□ -0.04
RPAIN-216ENST00000575599 POLGP54098 1239 aaPredicted RBP14.82□□□□□ -0.04
RPAIN-216ENST00000575599 NLRP11P59045 1033 aaKnown RBP14.82□□□□□ -0.04
RPAIN-216ENST00000575599 GRIN2CQ14957 1233 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 RILPL1Q5EBL4 403 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 XKR9Q5GH70 373 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 OTUD6AQ7L8S5 288 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 CCDC43Q96MW1 224 aaKnown RBP14.82□□□□□ -0.04
RPAIN-216ENST00000575599 CDX2Q99626 313 aaPredicted RBP14.82□□□□□ -0.04
RPAIN-216ENST00000575599 NOC2LQ9Y3T9 749 aaKnown RBP14.82□□□□□ -0.04
RPAIN-216ENST00000575599 ARID2Q68CP9 1835 aa14.82□□□□□ -0.04
RPAIN-216ENST00000575599 LCHNA4D1U4 455 aa14.81□□□□□ -0.04
RPAIN-216ENST00000575599 MAFO75444 373 aaPredicted RBP14.81□□□□□ -0.04
RPAIN-216ENST00000575599 IBSPP21815 317 aaPredicted RBP14.81□□□□□ -0.04
RPAIN-216ENST00000575599 DNM2P50570 870 aa14.81□□□□□ -0.04
RPAIN-216ENST00000575599 GPC3P51654 580 aa14.81□□□□□ -0.04
RPAIN-216ENST00000575599 PTGDRQ13258 359 aa14.81□□□□□ -0.04
RPAIN-216ENST00000575599 C4orf32Q8N8J7 132 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms