RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PSMC5P62195 406 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 RAB30Q15771 203 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 CALCRLQ16602 461 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 ECM1Q16610 540 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 XKR3Q5GH77 459 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 TTC38Q5R3I4 469 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 C4orf19Q8IY42 314 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 SLFN12Q8IYM2 578 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 LRRC15Q8TF66 581 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 MMTAG2Q9BU76 263 aaKnown RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMG6-216ENST00000575176 ZNF576Q9H609 170 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 TTC12Q9H892 705 aaPredicted RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 STXBP5LQ9Y2K9 1186 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 NOC2LQ9Y3T9 749 aaKnown RBP9.75□□□□□ -0.85
SMG6-216ENST00000575176 SAMM50Q9Y512 469 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 TTC28Q96AY4 2481 aa9.75□□□□□ -0.85
SMG6-216ENST00000575176 TDRD15B5MCY1 1934 aaKnown RBP9.74□□□□□ -0.85
SMG6-216ENST00000575176 LINC01553A4QN01 128 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 RPLP2P05387 115 aaKnown RBP9.74□□□□□ -0.85
SMG6-216ENST00000575176 OR52Z1P0C646 297 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 ACTN1P12814 892 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 FXR2P51116 673 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMG6-216ENST00000575176 CYP4A11Q02928 519 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 TRIM29Q14134 588 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 CTTNQ14247 550 aaKnown RBP9.74□□□□□ -0.85
SMG6-216ENST00000575176 ZNF174Q15697 407 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 KIZQ2M2Z5 673 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 TMEM266Q2M3C6 531 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 MTERF2Q49AM1 385 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 NCAPH2Q6IBW4 605 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 NME8Q8N427 588 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 USP38Q8NB14 1042 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 MYLIPQ8WY64 445 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 APBB2Q92870 758 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 TOP1MTQ969P6 601 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 SNX21Q969T3 373 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 ZNF689Q96CS4 500 aaPredicted RBP9.74□□□□□ -0.85
SMG6-216ENST00000575176 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 OSMRQ99650 979 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 EIF2AK1Q9BQI3 630 aaKnown RBP9.74□□□□□ -0.85
SMG6-216ENST00000575176 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
SMG6-216ENST00000575176 MTIF3Q9H2K0 278 aaKnown RBP9.74□□□□□ -0.85
SMG6-216ENST00000575176 CYP26B1Q9NR63 512 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 RNF19AQ9NV58 838 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 PADI3Q9ULW8 664 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 CEP131Q9UPN4 1083 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 TCHHQ07283 1943 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 TRIP11Q15643 1979 aa9.74□□□□□ -0.85
SMG6-216ENST00000575176 MYO7AQ13402 2215 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 PP2D1A8MPX8 630 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 EFCAB14O75071 495 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 ATF7P17544 494 aaPredicted RBP9.73□□□□□ -0.85
SMG6-216ENST00000575176 YWHABP31946 246 aaKnown RBP9.73□□□□□ -0.85
SMG6-216ENST00000575176 RARRES1P49788 294 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
SMG6-216ENST00000575176 RESTQ13127 1097 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 IKBKEQ14164 716 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 EFCAB12Q6NXP0 572 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 TRMT1LQ7Z2T5 733 aaKnown RBP9.73□□□□□ -0.85
SMG6-216ENST00000575176 FAM184AQ8NB25 1140 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 SEPT8Q92599 483 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 MINDY3Q9H8M7 445 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
SMG6-216ENST00000575176 ANK1P16157 1881 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 A0A087WWV3 80 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 C9IYK1 514 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
SMG6-216ENST00000575176 ENPP3O14638 875 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 MAGEB2O15479 319 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 DARSP14868 501 aaKnown RBP9.72□□□□□ -0.85
SMG6-216ENST00000575176 TXKP42681 527 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 CRYBB1P53674 252 aaPredicted RBP9.72□□□□□ -0.85
SMG6-216ENST00000575176 GRIN1Q05586 938 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 PTGDRQ13258 359 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 EMC2Q15006 297 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 SAFBQ15424 915 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMG6-216ENST00000575176 IER5Q5VY09 327 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 POTEGQ6S5H5 508 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 KCNK18Q7Z418 384 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 CATSPER3Q86XQ3 398 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 KSR1Q8IVT5 923 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 CKAP2LQ8IYA6 745 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 MYOCDQ8IZQ8 938 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 INTS4Q96HW7 963 aaKnown RBP9.72□□□□□ -0.85
SMG6-216ENST00000575176 ZNF668Q96K58 619 aaPredicted RBP9.72□□□□□ -0.85
SMG6-216ENST00000575176 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
SMG6-216ENST00000575176 PRDM12Q9H4Q4 367 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 ZSWIM4Q9H7M6 989 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 PCDHA12Q9UN75 941 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 MTMR6Q9Y217 621 aa9.72□□□□□ -0.85
SMG6-216ENST00000575176 TRIOO75962 3097 aa9.71□□□□□ -0.85
SMG6-216ENST00000575176 RFXAPO00287 272 aa9.71□□□□□ -0.86
SMG6-216ENST00000575176 DGKIO75912 1065 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms