RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 XIRP2A4UGR9 3374 aa12.77□□□□□ -0.37
RPAIN-214ENST00000574003 H3BNC9 293 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 GRM6O15303 877 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 CSDE1O75534 798 aaKnown RBP12.76□□□□□ -0.37
RPAIN-214ENST00000574003 DGKIO75912 1065 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 BMP1P13497 986 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 JAK3P52333 1124 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 NLRP11P59045 1033 aaKnown RBP12.76□□□□□ -0.37
RPAIN-214ENST00000574003 BTG3Q14201 252 aaPredicted RBP12.76□□□□□ -0.37
RPAIN-214ENST00000574003 ANKRD1Q15327 319 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 CRIPAKQ8N1N5 446 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 HAS1Q92839 578 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 FAM167AQ96KS9 214 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 ADAM2Q99965 735 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 ADAMTS10Q9H324 1103 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 AKT3Q9Y243 479 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 MRPL42Q9Y6G3 142 aaKnown RBP12.76□□□□□ -0.37
RPAIN-214ENST00000574003 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 KIAA1671Q9BY89 1806 aa12.76□□□□□ -0.37
RPAIN-214ENST00000574003 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 CCNT1O60563 726 aaKnown RBP12.75□□□□□ -0.37
RPAIN-214ENST00000574003 RPLP2P05387 115 aaKnown RBP12.75□□□□□ -0.37
RPAIN-214ENST00000574003 SFNP31947 248 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 BMPR1AP36894 532 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 CRYBB1P53674 252 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-214ENST00000574003 GUCY1B3Q02153 619 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 TARBP2Q15633 366 aaKnown RBP12.75□□□□□ -0.37
RPAIN-214ENST00000574003 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 MOXD1Q6UVY6 613 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 NPAS4Q8IUM7 802 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
RPAIN-214ENST00000574003 TNFRSF25Q93038 417 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 HLA-CQ95604 372 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 CEP89Q96ST8 783 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 FTHL17Q9BXU8 183 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 KCNMB3Q9NPA1 279 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 NRBP2Q9NSY0 501 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 WRAP73Q9P2S5 460 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-214ENST00000574003 CEP131Q9UPN4 1083 aa12.75□□□□□ -0.37
RPAIN-214ENST00000574003 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 BTBD18B2RXH4 712 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 MAGEB2O15479 319 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 XBP1P17861 261 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 KRT2P35908 639 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 NPEPPSP55786 919 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 TCEAL5Q5H9L2 206 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 FAM102BQ5T8I3 360 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 CCDC83Q8IWF9 413 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 SYMPKQ92797 1274 aaKnown RBP12.74□□□□□ -0.37
RPAIN-214ENST00000574003 MRPL38Q96DV4 380 aaKnown RBP12.74□□□□□ -0.37
RPAIN-214ENST00000574003 SAMD11Q96NU1 681 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 MAP7D2Q96T17 732 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-214ENST00000574003 KIF2CQ99661 725 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 ALG13Q9NP73 1137 aaKnown RBP12.74□□□□□ -0.37
RPAIN-214ENST00000574003 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-214ENST00000574003 LMCD1Q9NZU5 365 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 LRFN2Q9ULH4 789 aa12.74□□□□□ -0.37
RPAIN-214ENST00000574003 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 C9IYK1 514 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 ZBTB39O15060 712 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 FGFR1P11362 822 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 DNAJB1P25685 340 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 GTF2F1P35269 517 aaKnown RBP eCLIP12.73□□□□□ -0.37
RPAIN-214ENST00000574003 SARSP49591 514 aaKnown RBP12.73□□□□□ -0.37
RPAIN-214ENST00000574003 GPC3P51654 580 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 TBC1D8BQ0IIM8 1120 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 DSC3Q14574 896 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 ANO5Q75V66 913 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 KSR1Q8IVT5 923 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 FAM177A1Q8N128 213 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-214ENST00000574003 IL27Q8NEV9 243 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 WASF1Q92558 559 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 CLP1Q92989 425 aaKnown RBP12.73□□□□□ -0.37
RPAIN-214ENST00000574003 NIFKQ9BYG3 293 aaKnown RBP12.73□□□□□ -0.37
RPAIN-214ENST00000574003 UBE2ZQ9H832 354 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-214ENST00000574003 RGS18Q9NS28 235 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 PCDHB7Q9Y5E2 793 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 PCDHGC5Q9Y5F6 944 aa12.73□□□□□ -0.37
RPAIN-214ENST00000574003 FNDC1Q4ZHG4 1894 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-214ENST00000574003 MUC3AQ02505 3323 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 A0A087WWV3 80 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 TBKBP1A7MCY6 615 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-214ENST00000574003 TNFRSF10AO00220 468 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 GPR182O15218 404 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 MARCH6O60337 910 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 STAG3L1P0CL83 205 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 ATP2B1P20020 1258 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 KCNA5P22460 613 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 TMOD1P28289 359 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 PSMC5P62195 406 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 PPP2R5CQ13362 524 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms