RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 CATSPER3Q86XQ3 398 aa23.64■■□□□ 1.37
ABR-221ENST00000573559 ZNF579Q8NAF0 562 aaKnown RBP23.64■■□□□ 1.37
ABR-221ENST00000573559 SLC7A3Q8WY07 619 aa23.64■■□□□ 1.37
ABR-221ENST00000573559 SCLT1Q96NL6 688 aa23.64■■□□□ 1.37
ABR-221ENST00000573559 JPH2Q9BR39 696 aaPredicted RBP23.64■■□□□ 1.37
ABR-221ENST00000573559 KDM3AQ9Y4C1 1321 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 PTPRSQ13332 1948 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 EFCAB14O75071 495 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 LYPLA2O95372 231 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 SPATA31C1P0DKV0 1188 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 CD52P31358 61 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 CCT6AP40227 531 aaKnown RBP23.63■■□□□ 1.37
ABR-221ENST00000573559 DNM2P50570 870 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 WDR5P61964 334 aaKnown RBP23.63■■□□□ 1.37
ABR-221ENST00000573559 DRP2Q13474 957 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 POTEGQ6S5H5 508 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 SNX29Q8TEQ0 813 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 PIGOQ8TEQ8 1089 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 APBB2Q92870 758 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 ZNF668Q96K58 619 aaPredicted RBP23.63■■□□□ 1.37
ABR-221ENST00000573559 SLC9A7Q96T83 725 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 OSMRQ99650 979 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 POLR3CQ9BUI4 534 aaPredicted RBP23.63■■□□□ 1.37
ABR-221ENST00000573559 CDHR5Q9HBB8 845 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 PPME1Q9Y570 386 aa23.63■■□□□ 1.37
ABR-221ENST00000573559 A0A087WWV3 80 aa23.62■■□□□ 1.37
ABR-221ENST00000573559 MAFO75444 373 aaPredicted RBP23.62■■□□□ 1.37
ABR-221ENST00000573559 RFC5P40937 340 aa23.62■■□□□ 1.37
ABR-221ENST00000573559 NLRP11P59045 1033 aaKnown RBP23.62■■□□□ 1.37
ABR-221ENST00000573559 SF3A1Q15459 793 aaKnown RBP23.62■■□□□ 1.37
ABR-221ENST00000573559 IL17AQ16552 155 aa23.62■■□□□ 1.37
ABR-221ENST00000573559 FOXD4L5Q5VV16 416 aaPredicted RBP23.62■■□□□ 1.37
ABR-221ENST00000573559 FAM173BQ6P4H8 233 aa23.62■■□□□ 1.37
ABR-221ENST00000573559 IGSF22Q8N9C0 903 aa23.62■■□□□ 1.37
ABR-221ENST00000573559 FOXD4L4Q8WXT5 416 aaPredicted RBP23.62■■□□□ 1.37
ABR-221ENST00000573559 AGO3Q9H9G7 860 aaKnown RBP23.62■■□□□ 1.37
ABR-221ENST00000573559 ANKEF1Q9NU02 776 aa23.62■■□□□ 1.37
ABR-221ENST00000573559 MYH15Q9Y2K3 1946 aa23.62■■□□□ 1.37
ABR-221ENST00000573559 IGKV6-21A0A0C4DH24 114 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 VWA3AA6NCI4 1184 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 PP2D1A8MPX8 630 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 BMP15O95972 392 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 RPA1P27694 616 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 DEFB103AP81534 67 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 PAK2Q13177 524 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 PDIA5Q14554 519 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 EMC2Q15006 297 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 EXOC8Q8IYI6 725 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 USP38Q8NB14 1042 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 ZSCAN16Q9H4T2 348 aaPredicted RBP23.61■■□□□ 1.37
ABR-221ENST00000573559 STK24Q9Y6E0 443 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 SQORQ9Y6N5 450 aa23.61■■□□□ 1.37
ABR-221ENST00000573559 GPR32O75388 356 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 DNAJB2P25686 324 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 GPC3P51654 580 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 RABGGTBP53611 331 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 CRYBB1P53674 252 aaPredicted RBP23.6■■□□□ 1.37
ABR-221ENST00000573559 MKRN4PQ13434 485 aaPredicted RBP23.6■■□□□ 1.37
ABR-221ENST00000573559 KRT79Q5XKE5 535 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 ARL6IP4Q66PJ3 421 aaKnown RBP23.6■■□□□ 1.37
ABR-221ENST00000573559 TMEM40Q8WWA1 233 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 NLRP7Q8WX94 980 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 MTRQ99707 1265 aa23.6■■□□□ 1.37
ABR-221ENST00000573559 DHX33Q9H6R0 707 aaKnown RBP23.6■■□□□ 1.37
ABR-221ENST00000573559 SUCLA2Q9P2R7 463 aaPredicted RBP23.6■■□□□ 1.37
ABR-221ENST00000573559 RPS6KA5O75582 802 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 AMHP03971 560 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 CDC25AP30304 524 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 PBX2P40425 430 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 RARRES1P49788 294 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 CEBPZQ03701 1054 aaKnown RBP23.59■■□□□ 1.37
ABR-221ENST00000573559 BECN1Q14457 450 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.59■■□□□ 1.37
ABR-221ENST00000573559 TMCO2Q7Z6W1 182 aaPredicted RBP23.59■■□□□ 1.37
ABR-221ENST00000573559 RHPN2Q8IUC4 686 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 MYOCDQ8IZQ8 938 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 PHOSPHO2Q8TCD6 241 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 TMEM143Q96AN5 459 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 NACC1Q96RE7 527 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 PBX4Q9BYU1 374 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 MSRAQ9UJ68 235 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 PADI3Q9ULW8 664 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 NOC2LQ9Y3T9 749 aaKnown RBP23.59■■□□□ 1.37
ABR-221ENST00000573559 CLIC4Q9Y696 253 aa23.59■■□□□ 1.37
ABR-221ENST00000573559 USO1O60763 962 aaKnown RBP23.58■■□□□ 1.37
ABR-221ENST00000573559 NFX1Q12986 1120 aaKnown RBP23.58■■□□□ 1.37
ABR-221ENST00000573559 ZRSR1Q15695 479 aaKnown RBP23.58■■□□□ 1.37
ABR-221ENST00000573559 RAB30Q15771 203 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 ECM1Q16610 540 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 FAM117BQ6P1L5 589 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 HERC6Q8IVU3 1022 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 NLRP4Q96MN2 994 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 ADAMTS10Q9H324 1103 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 ATP6V0A4Q9HBG4 840 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 KIAA1024Q9UPX6 916 aa23.58■■□□□ 1.37
ABR-221ENST00000573559 GAS2O43903 313 aaKnown RBP23.57■■□□□ 1.36
ABR-221ENST00000573559 DGAT1O75907 488 aa23.57■■□□□ 1.36
ABR-221ENST00000573559 XRCC6P12956 609 aaKnown RBP eCLIP23.57■■□□□ 1.36
ABR-221ENST00000573559 PDIA4P13667 645 aaKnown RBP23.57■■□□□ 1.36
ABR-221ENST00000573559 MUTP22033 750 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms