RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 CHTF18Q8WVB6 975 aa6.64□□□□□ -1.35
CDC27-215ENST00000573550 ELF4Q99607 663 aaPredicted RBP6.64□□□□□ -1.35
CDC27-215ENST00000573550 FOXB1Q99853 325 aa6.64□□□□□ -1.35
CDC27-215ENST00000573550 ZKSCAN5Q9Y2L8 839 aa6.64□□□□□ -1.35
CDC27-215ENST00000573550 SNAPC4Q5SXM2 1469 aa6.64□□□□□ -1.35
CDC27-215ENST00000573550 CUTAO60888 179 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 ADCY8P40145 1251 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 CD83Q01151 205 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 UBXN11Q5T124 520 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 TMEM200BQ69YZ2 307 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 GPR155Q7Z3F1 870 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 RNF180Q86T96 592 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 KBTBD2Q8IY47 623 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 SMC1BQ8NDV3 1235 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 MAPRE3Q9UPY8 281 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 ZDHHC9Q9Y397 364 aa6.63□□□□□ -1.35
CDC27-215ENST00000573550 EHBP1L1Q8N3D4 1523 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 SETD5Q9C0A6 1442 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 TTBK1Q5TCY1 1321 aaPredicted RBP6.62□□□□□ -1.35
CDC27-215ENST00000573550 FOXD2O60548 495 aaPredicted RBP6.62□□□□□ -1.35
CDC27-215ENST00000573550 MAFO75444 373 aaPredicted RBP6.62□□□□□ -1.35
CDC27-215ENST00000573550 ZNF888P0CJ79 500 aaPredicted RBP6.62□□□□□ -1.35
CDC27-215ENST00000573550 ETV4P43268 484 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 EPHA7Q15375 998 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 TAF7LQ5H9L4 462 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 PLEKHH3Q7Z736 793 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 RALYLQ86SE5 291 aaKnown RBP6.62□□□□□ -1.35
CDC27-215ENST00000573550 EFHBQ8N7U6 833 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 CALML6Q8TD86 181 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 RELTQ969Z4 430 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 ZDHHC5Q9C0B5 715 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 IFT57Q9NWB7 429 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 THG1LQ9NWX6 298 aaKnown RBP6.62□□□□□ -1.35
CDC27-215ENST00000573550 FBXO10Q9UK96 956 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 PTPN22Q9Y2R2 807 aa6.62□□□□□ -1.35
CDC27-215ENST00000573550 AKNAQ7Z591 1439 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 UBA6A0AVT1 1052 aaPredicted RBP6.61□□□□□ -1.35
CDC27-215ENST00000573550 PLATP00750 562 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 APEX1P27695 318 aaKnown RBP6.61□□□□□ -1.35
CDC27-215ENST00000573550 RGS3P49796 1198 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 SLC6A3Q01959 620 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 MOGSQ13724 837 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 TBC1D10BQ4KMP7 808 aaPredicted RBP6.61□□□□□ -1.35
CDC27-215ENST00000573550 E2F7Q96AV8 911 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 MAML3Q96JK9 1138 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 ZMAT4Q9H898 229 aa6.61□□□□□ -1.35
CDC27-215ENST00000573550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDC27-215ENST00000573550 CCDC18Q5T9S5 1454 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 RAB3GAP2Q9H2M9 1393 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 SUPT6HQ7KZ85 1726 aaKnown RBP6.6□□□□□ -1.35
CDC27-215ENST00000573550 TGM5O43548 720 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 B4GALT4O60513 344 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 STAT3P40763 770 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 ADCYAP1R1P41586 468 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 SCNN1BP51168 640 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 USP10Q14694 798 aaKnown RBP6.6□□□□□ -1.35
CDC27-215ENST00000573550 EIF4HQ15056 248 aaKnown RBP6.6□□□□□ -1.35
CDC27-215ENST00000573550 EGFLAMQ63HQ2 1017 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 GRAMD4Q6IC98 578 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 OTOP2Q7RTS6 562 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 NME9Q86XW9 330 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
CDC27-215ENST00000573550 OR2W6PQ8NHA6 318 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 LEO1Q8WVC0 666 aaPredicted RBP6.6□□□□□ -1.35
CDC27-215ENST00000573550 RBM15Q96T37 977 aaKnown RBP eCLIP6.6□□□□□ -1.358e-12■■□□□ 13.8
CDC27-215ENST00000573550 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 SSBP3Q9BWW4 388 aaPredicted RBP6.6□□□□□ -1.35
CDC27-215ENST00000573550 CARD11Q9BXL7 1154 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 SLKQ9H2G2 1235 aaPredicted RBP6.6□□□□□ -1.35
CDC27-215ENST00000573550 TOMM22Q9NS69 142 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 SLC4A7Q9Y6M7 1214 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 GCC2Q8IWJ2 1684 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 ARHGEF11O15085 1522 aa6.6□□□□□ -1.35
CDC27-215ENST00000573550 A0A0G2JNJ9 132 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 LAMTOR5O43504 91 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 CNOT4O95628 575 aaKnown RBP6.59□□□□□ -1.35
CDC27-215ENST00000573550 HMGCRP04035 888 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 SYN1P17600 705 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 LSSP48449 732 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 MASP1P48740 699 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 KCNQ1P51787 676 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 KPNA1P52294 538 aaPredicted RBP6.59□□□□□ -1.35
CDC27-215ENST00000573550 EPHB4P54760 987 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 SMAD3P84022 425 aaKnown RBP6.59□□□□□ -1.35
CDC27-215ENST00000573550 ROM1Q03395 351 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 MYBPC3Q14896 1274 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 SURF1Q15526 300 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 ZNF827Q17R98 1081 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 TTC38Q5R3I4 469 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 TRIM68Q6AZZ1 485 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 SLFN12LQ6IEE8 588 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 LARP4Q71RC2 724 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDC27-215ENST00000573550 WDR48Q8TAF3 677 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 GPR101Q96P66 508 aaPredicted RBP6.59□□□□□ -1.35
CDC27-215ENST00000573550 SPTLC3Q9NUV7 552 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 Q9UFV3 132 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 CDC42EP3Q9UKI2 254 aa6.59□□□□□ -1.35
CDC27-215ENST00000573550 GRIN2BQ13224 1484 aa6.59□□□□□ -1.36
CDC27-215ENST00000573550 FGD6Q6ZV73 1430 aa6.59□□□□□ -1.36
CDC27-215ENST00000573550 PHLDB1Q86UU1 1377 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms