RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 BRDTQ58F21 947 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-209ENST00000573474 FAM102BQ5T8I3 360 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 MAEAQ7L5Y9 396 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 TLK2Q86UE8 772 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 TRIM50Q86XT4 487 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 EXOC8Q8IYI6 725 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 DAW1Q8N136 415 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 TRPV1Q8NER1 839 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 ZNF296Q8WUU4 475 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-209ENST00000573474 KIFAP3Q92845 792 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 P2RX5Q93086 422 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 MRPL44Q9H9J2 332 aaKnown RBP15.14■□□□□ 0.01
CCDC40-209ENST00000573474 ATP6V0A4Q9HBG4 840 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 LARSQ9P2J5 1176 aaKnown RBP15.14■□□□□ 0.01
CCDC40-209ENST00000573474 NFE2L3Q9Y4A8 694 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 ZSWIM8A7E2V4 1837 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 SYNRGQ9UMZ2 1314 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 WDR81Q562E7 1941 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 ADCY3O60266 1144 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 PLS3P13797 630 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 MARK3P27448 753 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 POLGP54098 1239 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 C1QTNF8P60827 252 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 CACNB2Q08289 660 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 TPD52L1Q16890 204 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 ODR4Q5SWX8 454 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 STXBP4Q6ZWJ1 553 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 EPM2AIP1Q7L775 607 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 SLC17A8Q8NDX2 589 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 RAET1EQ8TD07 263 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 CEP89Q96ST8 783 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 C16orf70Q9BSU1 422 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 DHX33Q9H6R0 707 aaKnown RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 C17orf75Q9HAS0 396 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 FANCLQ9NW38 375 aa15.13■□□□□ 0.01
CCDC40-209ENST00000573474 ZNF215Q9UL58 517 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 MYH9P35579 1960 aaKnown RBP15.13■□□□□ 0.01
CCDC40-209ENST00000573474 EIF3DO15371 548 aaKnown RBP eCLIP15.12■□□□□ 0.01
CCDC40-209ENST00000573474 DUSP11O75319 330 aaKnown RBP15.12■□□□□ 0.01
CCDC40-209ENST00000573474 CPT1AP50416 773 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 RTP1P59025 263 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 EMC2Q15006 297 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 ZNF484Q5JVG2 852 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 CENPPQ6IPU0 288 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 FOXR2Q6PJQ5 311 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 ZNF720Q7Z2F6 126 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 FAM178BQ8IXR5 827 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 GLIS3Q8NEA6 775 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 ZNF507Q8TCN5 953 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 PXYLP1Q8TE99 480 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 SCFD1Q8WVM8 642 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 FGFBP2Q9BYJ0 223 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 XPNPEP1Q9NQW7 623 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 TRPC6Q9Y210 931 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 PCDHB13Q9Y5F0 798 aa15.12■□□□□ 0.01
CCDC40-209ENST00000573474 CASP8AP2Q9UKL3 1982 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 H3BRB1 525 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 SEPT4O43236 478 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 MAFO75444 373 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-209ENST00000573474 GCNT3O95395 438 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 HMGCRP04035 888 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 MYBP10242 640 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 ELNP15502 786 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 CNGA1P29973 690 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 NMT1P30419 496 aaKnown RBP15.11■□□□□ 0.01
CCDC40-209ENST00000573474 DEKP35659 375 aaKnown RBP15.11■□□□□ 0.01
CCDC40-209ENST00000573474 CASP5P51878 434 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 TBC1D8BQ0IIM8 1120 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 TRIM32Q13049 653 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 ALCAMQ13740 583 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 BMT2Q1RMZ1 405 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 ANKRD40Q6AI12 368 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 TTI2Q6NXR4 508 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 SARM1Q6SZW1 724 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 NOC3LQ8WTT2 800 aaKnown RBP15.11■□□□□ 0.01
CCDC40-209ENST00000573474 LENG1Q96BZ8 264 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-209ENST00000573474 FIZ1Q96SL8 496 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 TSG101Q99816 390 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-209ENST00000573474 HSD3B7Q9H2F3 369 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 SEMA6BQ9H3T3 888 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 RNPEPQ9H4A4 650 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 TUT1Q9H6E5 874 aaKnown RBP15.11■□□□□ 0.01
CCDC40-209ENST00000573474 GPRC5CQ9NQ84 441 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 UBE4BO95155 1302 aa15.11■□□□□ 0.01
CCDC40-209ENST00000573474 TRIM49BA6NDI0 452 aa15.1■□□□□ 0.01
CCDC40-209ENST00000573474 ZBTB42B2RXF5 422 aa15.1■□□□□ 0.01
CCDC40-209ENST00000573474 GAS2O43903 313 aaKnown RBP15.1■□□□□ 0.01
CCDC40-209ENST00000573474 PRKAR2AP13861 404 aaKnown RBP15.1■□□□□ 0.01
CCDC40-209ENST00000573474 ZNF18P17022 549 aa15.1■□□□□ 0.01
CCDC40-209ENST00000573474 SMTNP53814 917 aa15.1■□□□□ 0.01
CCDC40-209ENST00000573474 PMS1P54277 932 aaKnown RBP15.1■□□□□ 0.01
CCDC40-209ENST00000573474 GJA9P57773 515 aa15.1■□□□□ 0.01
CCDC40-209ENST00000573474 LRRC63Q05C16 580 aa15.1■□□□□ 0.01
CCDC40-209ENST00000573474 DMP1Q13316 513 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms