RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 FAM110CQ1W6H9 321 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 XXYLT1Q8NBI6 393 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 LZTFL1Q9NQ48 299 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 CHD4Q14839 1912 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 TRIM49BA6NDI0 452 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 TMEM110-MUSTN1A8MSY1 372 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 LPXNO60711 386 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 LDHAP00338 332 aaKnown RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 AFPP02771 609 aaKnown RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 OATP04181 439 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 VSIG10LQ86VR7 867 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 NT5C1BQ96P26 610 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 TINF2Q9BSI4 451 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 ANKEF1Q9NU02 776 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 RIPK3Q9Y572 518 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 FAM170AA1A519 330 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 TACC1O75410 805 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 SUPT20HL2P0C7V6 817 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 ADKP55263 362 aaKnown RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 MXD4Q14582 209 aaPredicted RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 GUF1Q8N442 669 aaKnown RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 TEPSINQ96N21 525 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 MRPL4Q9BYD3 311 aaKnown RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 ODF2LQ9ULJ1 636 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 MED24O75448 989 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 NR3C1P04150 777 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 EFNA5P52803 228 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 MAPK8IP2Q13387 824 aaPredicted RBP11.02□□□□□ -0.64
SMG6-213ENST00000573166 ACVR2BQ13705 512 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 EFCAB12Q6NXP0 572 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 OR8K1Q8NGG5 319 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 NUCKS1Q9H1E3 243 aaKnown RBP11.02□□□□□ -0.64
SMG6-213ENST00000573166 ST7Q9NRC1 585 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 TOPORSQ9NS56 1045 aaPredicted RBP11.02□□□□□ -0.64
SMG6-213ENST00000573166 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.64
SMG6-213ENST00000573166 INPP5FQ9Y2H2 1132 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 PLIN4Q96Q06 1357 aa11.02□□□□□ -0.64
SMG6-213ENST00000573166 A0A0G2JLL6 359 aaPredicted RBP11.02□□□□□ -0.65
SMG6-213ENST00000573166 NAALADL2Q58DX5 795 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 CYP26C1Q6V0L0 522 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 PRRT2Q7Z6L0 340 aaPredicted RBP11.02□□□□□ -0.65
SMG6-213ENST00000573166 ARRDC4Q8NCT1 418 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 TIPINQ9BVW5 301 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 PHLPP2Q6ZVD8 1323 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 RRN3P2A6NIE6 340 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 AKR1A1P14550 325 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 RFC5P40937 340 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 ADCYAP1R1P41586 468 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 TNNC1P63316 161 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 JAG1P78504 1218 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 RUFY1Q96T51 708 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 ZBED2Q9BTP6 218 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 PLVAPQ9BX97 442 aa11.02□□□□□ -0.65
SMG6-213ENST00000573166 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.65
SMG6-213ENST00000573166 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
SMG6-213ENST00000573166 H3BRB1 525 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 SLC26A4O43511 780 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 MAP2K5Q13163 448 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
SMG6-213ENST00000573166 IMPACTQ9P2X3 320 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 ADCY3O60266 1144 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 SURF1Q15526 300 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 IER5Q5VY09 327 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 LMBR1Q8WVP7 490 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 BRI3BPQ8WY22 251 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 IQCDQ96DY2 449 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 THAP9Q9H5L6 903 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 KCND2Q9NZV8 630 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 ADAMTS7Q9UKP4 1686 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 SPEF2Q9C093 1822 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 ZBBXA8MT70 800 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 FKTNO75072 461 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 PRKCBP05771 671 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 ATP1A3P13637 1013 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 LACTBP83111 547 aaPredicted RBP11.01□□□□□ -0.65
SMG6-213ENST00000573166 KCNB1Q14721 858 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 HS1BP3Q53T59 392 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 CCDC122Q5T0U0 273 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 INTS8Q75QN2 995 aaKnown RBP11.01□□□□□ -0.65
SMG6-213ENST00000573166 TMTC1Q8IUR5 882 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 PCSK9Q8NBP7 692 aaKnown RBP11.01□□□□□ -0.65
SMG6-213ENST00000573166 SAAL1Q96ER3 474 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 C12orf42Q96LP6 360 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 C7orf25Q9BPX7 421 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 PORCNQ9H237 461 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 PHF20L1A8MW92 1017 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMG6-213ENST00000573166 PPP1R11O60927 126 aaPredicted RBP11.01□□□□□ -0.65
SMG6-213ENST00000573166 CYP11B2P19099 503 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 GRB10Q13322 594 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 BMS1Q14692 1282 aaKnown RBP11.01□□□□□ -0.65
SMG6-213ENST00000573166 PTPN21Q16825 1174 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 PRAMEF19Q5SWL8 479 aa11.01□□□□□ -0.65
SMG6-213ENST00000573166 NIPA1Q7RTP0 329 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms