RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FBXO22Q8NEZ5 403 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 PPP1R16BQ96T49 567 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 OSMRQ99650 979 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 FTHL17Q9BXU8 183 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 NIFKQ9BYG3 293 aaKnown RBP19.52■□□□□ 0.72
SMG6-212ENST00000573153 SAMM50Q9Y512 469 aa19.52■□□□□ 0.72
SMG6-212ENST00000573153 BRWD1Q9NSI6 2320 aa19.52■□□□□ 0.71
SMG6-212ENST00000573153 BMP1P13497 986 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 GATMP50440 423 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 CRYBB1P53674 252 aaPredicted RBP19.51■□□□□ 0.71
SMG6-212ENST00000573153 ANO5Q75V66 913 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 MIER3Q7Z3K6 550 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 SAMD11Q96NU1 681 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 TCEAL9Q9UHQ7 104 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 ST3GAL5Q9UNP4 418 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 CEP131Q9UPN4 1083 aa19.51■□□□□ 0.71
SMG6-212ENST00000573153 C9IYK1 514 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 M0QZ92 97 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 MAGEB2O15479 319 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 KCNQ1P51787 676 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 MRPS5P82675 430 aaKnown RBP19.5■□□□□ 0.71
SMG6-212ENST00000573153 CAMK1Q14012 370 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 COL19A1Q14993 1142 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 EFCAB12Q6NXP0 572 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 NPAS4Q8IUM7 802 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 SH2D3AQ9BRG2 576 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 RGS18Q9NS28 235 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 RNF19AQ9NV58 838 aa19.5■□□□□ 0.71
SMG6-212ENST00000573153 MRPL42Q9Y6G3 142 aaKnown RBP19.5■□□□□ 0.71
SMG6-212ENST00000573153 FNDC1Q4ZHG4 1894 aaPredicted RBP19.5■□□□□ 0.71
SMG6-212ENST00000573153 CCDC194A0A1B0GVG4 234 aa19.49■□□□□ 0.71
SMG6-212ENST00000573153 RPS6KA5O75582 802 aa19.49■□□□□ 0.71
SMG6-212ENST00000573153 MMP1P03956 469 aa19.49■□□□□ 0.71
SMG6-212ENST00000573153 GCFC2P16383 781 aaKnown RBP19.49■□□□□ 0.71
SMG6-212ENST00000573153 GPC3P51654 580 aa19.49■□□□□ 0.71
SMG6-212ENST00000573153 FAM43BQ6ZT52 329 aaPredicted RBP19.49■□□□□ 0.71
SMG6-212ENST00000573153 BANK1Q8NDB2 785 aa19.49■□□□□ 0.71
SMG6-212ENST00000573153 MRPL38Q96DV4 380 aaKnown RBP19.49■□□□□ 0.71
SMG6-212ENST00000573153 FAM20AQ96MK3 541 aa19.49■□□□□ 0.71
SMG6-212ENST00000573153 GINS2Q9Y248 185 aa19.49■□□□□ 0.71
SMG6-212ENST00000573153 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.48■□□□□ 0.71
SMG6-212ENST00000573153 BTBD18B2RXH4 712 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 TBX3O15119 743 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 BMPR1AP36894 532 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 SARSP49591 514 aaKnown RBP19.48■□□□□ 0.71
SMG6-212ENST00000573153 RBM25P49756 843 aaKnown RBP19.48■□□□□ 0.71
SMG6-212ENST00000573153 FAM189BP81408 668 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 GPM6BQ13491 265 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 XKR3Q5GH77 459 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 CMTR2Q8IYT2 770 aaKnown RBP19.48■□□□□ 0.71
SMG6-212ENST00000573153 FIBCD1Q8N539 461 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 METTL13Q8N6R0 699 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 ZNF579Q8NAF0 562 aaKnown RBP19.48■□□□□ 0.71
SMG6-212ENST00000573153 LIMCH1Q9UPQ0 1083 aa19.48■□□□□ 0.71
SMG6-212ENST00000573153 ARID2Q68CP9 1835 aa19.47■□□□□ 0.71
SMG6-212ENST00000573153 GRM6O15303 877 aa19.47■□□□□ 0.71
SMG6-212ENST00000573153 KRT2P35908 639 aa19.47■□□□□ 0.71
SMG6-212ENST00000573153 NLRP11P59045 1033 aaKnown RBP19.47■□□□□ 0.71
SMG6-212ENST00000573153 NFX1Q12986 1120 aaKnown RBP19.47■□□□□ 0.71
SMG6-212ENST00000573153 ADAMTS19Q8TE59 1207 aa19.47■□□□□ 0.71
SMG6-212ENST00000573153 ZNF668Q96K58 619 aaPredicted RBP19.47■□□□□ 0.71
SMG6-212ENST00000573153 NAP1L4Q99733 375 aaKnown RBP19.47■□□□□ 0.71
SMG6-212ENST00000573153 ADAM2Q99965 735 aa19.47■□□□□ 0.71
SMG6-212ENST00000573153 NRBP2Q9NSY0 501 aa19.47■□□□□ 0.71
SMG6-212ENST00000573153 HCSTQ9UBK5 93 aa19.47■□□□□ 0.71
SMG6-212ENST00000573153 CCNT1O60563 726 aaKnown RBP19.46■□□□□ 0.71
SMG6-212ENST00000573153 DNAJB1P25685 340 aa19.46■□□□□ 0.71
SMG6-212ENST00000573153 MTERF2Q49AM1 385 aa19.46■□□□□ 0.71
SMG6-212ENST00000573153 PLA2G4FQ68DD2 849 aa19.46■□□□□ 0.71
SMG6-212ENST00000573153 DIS3L2Q8IYB7 885 aaKnown RBP19.46■□□□□ 0.71
SMG6-212ENST00000573153 IL27Q8NEV9 243 aa19.46■□□□□ 0.71
SMG6-212ENST00000573153 SEPT9Q9UHD8 586 aaPredicted RBP19.46■□□□□ 0.71
SMG6-212ENST00000573153 COG5Q9UP83 839 aa19.46■□□□□ 0.71
SMG6-212ENST00000573153 TCF20Q9UGU0 1960 aaKnown RBP19.45■□□□□ 0.7
SMG6-212ENST00000573153 GPR182O15218 404 aa19.45■□□□□ 0.7
SMG6-212ENST00000573153 MAFO75444 373 aaPredicted RBP19.45■□□□□ 0.7
SMG6-212ENST00000573153 RB1P06400 928 aa19.45■□□□□ 0.7
SMG6-212ENST00000573153 DARSP14868 501 aaKnown RBP19.45■□□□□ 0.7
SMG6-212ENST00000573153 CTNNB1P35222 781 aa19.45■□□□□ 0.7
SMG6-212ENST00000573153 PSMC5P62195 406 aa19.45■□□□□ 0.7
SMG6-212ENST00000573153 BTG3Q14201 252 aaPredicted RBP19.45■□□□□ 0.7
SMG6-212ENST00000573153 SYMPKQ92797 1274 aaKnown RBP19.45■□□□□ 0.7
SMG6-212ENST00000573153 NECAB3Q96P71 396 aaPredicted RBP19.45■□□□□ 0.7
SMG6-212ENST00000573153 LLPHQ9BRT6 129 aaKnown RBP19.45■□□□□ 0.7
SMG6-212ENST00000573153 AKT3Q9Y243 479 aa19.45■□□□□ 0.7
SMG6-212ENST00000573153 MYO7AQ13402 2215 aa19.45■□□□□ 0.7
SMG6-212ENST00000573153 PLXNA4Q9HCM2 1894 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 ATF7P17544 494 aaPredicted RBP19.44■□□□□ 0.7
SMG6-212ENST00000573153 FGFR4P22455 802 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 EIF4BP23588 611 aaKnown RBP19.44■□□□□ 0.7
SMG6-212ENST00000573153 FOSBP53539 338 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 NPEPPSP55786 919 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 TBC1D8BQ0IIM8 1120 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 FAM102BQ5T8I3 360 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 SLC24A5Q71RS6 500 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 CCDC83Q8IWF9 413 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 HLA-CQ95604 372 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 ZSCAN31Q96LW9 406 aaPredicted RBP19.44■□□□□ 0.7
SMG6-212ENST00000573153 MTMR9Q96QG7 549 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms