RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MSRAQ9UJ68 235 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 TELO2Q9Y4R8 837 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 LAMA3Q16787 3333 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 GSTTP1A0A1W2PQM5 241 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 TREHO43280 583 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 ZIC2O95409 532 aaPredicted RBP8.47□□□□□ -1.05
NUP88-205ENST00000572809 BRD1O95696 1058 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 SMIM10L2AP0DMW4 78 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 SMIM10L2BP0DMW5 78 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 ARP10275 920 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 IFNAR1P17181 557 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 GNA11P29992 359 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 TCF7P36402 384 aaPredicted RBP8.47□□□□□ -1.05
NUP88-205ENST00000572809 SREBF1P36956 1147 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 RBL2Q08999 1139 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 GPNMBQ14956 572 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 GRIN2CQ14957 1233 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 AGERQ15109 404 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 RAB30Q15771 203 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 CEP55Q53EZ4 464 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 ZNF618Q5T7W0 954 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 JAKMIP3Q5VZ66 844 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 LRRC8DQ7L1W4 858 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
NUP88-205ENST00000572809 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 SLC17A8Q8NDX2 589 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 ATP6V0A1Q93050 837 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 SLC26A6Q9BXS9 759 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 RNF26Q9BY78 433 aaPredicted RBP8.47□□□□□ -1.05
NUP88-205ENST00000572809 ANO3Q9BYT9 981 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 UPF3BQ9BZI7 483 aaKnown RBP8.47□□□□□ -1.05
NUP88-205ENST00000572809 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
NUP88-205ENST00000572809 SETD4Q9NVD3 440 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 ZNF215Q9UL58 517 aaPredicted RBP8.47□□□□□ -1.05
NUP88-205ENST00000572809 NID2Q14112 1375 aa8.47□□□□□ -1.05
NUP88-205ENST00000572809 ESYT2A0FGR8 921 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 RSPH10B2B2RC85 870 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 MEIS1O00470 390 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 CPLX1O14810 134 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 EIF5BO60841 1220 aaKnown RBP8.46□□□□□ -1.06
NUP88-205ENST00000572809 CYP3A4P08684 503 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 RSPH10BP0C881 870 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 ATP2A2P16615 1042 aaKnown RBP8.46□□□□□ -1.06
NUP88-205ENST00000572809 HOXC8P31273 242 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 THPOP40225 353 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 RABGGTBP53611 331 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 SSRP1Q08945 709 aaKnown RBP8.46□□□□□ -1.06
NUP88-205ENST00000572809 TRIM71Q2Q1W2 868 aaKnown RBP8.46□□□□□ -1.06
NUP88-205ENST00000572809 MAP7D1Q3KQU3 841 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 NIPA1Q7RTP0 329 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 SERINC5Q86VE9 423 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 TRIM50Q86XT4 487 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 TRIM22Q8IYM9 498 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 PHOSPHO2Q8TCD6 241 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 BICD2Q8TD16 824 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 MYLIPQ8WY64 445 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 GLG1Q92896 1179 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 WNT8BQ93098 351 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 SDF4Q9BRK5 362 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 SMARCAD1Q9H4L7 1026 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 SLC28A3Q9HAS3 691 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 AGO4Q9HCK5 861 aaKnown RBP8.46□□□□□ -1.06
NUP88-205ENST00000572809 ERAP1Q9NZ08 941 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 SLC9A2Q9UBY0 812 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 NRCAMQ92823 1304 aa8.46□□□□□ -1.06
NUP88-205ENST00000572809 TRIP12Q14669 1992 aaPredicted RBP8.46□□□□□ -1.06
NUP88-205ENST00000572809 KIF28PB7ZC32 967 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 RNF225M0QZC1 329 aaPredicted RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 ADAMTS3O15072 1205 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 NBNO60934 754 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 BAIAP3O94812 1187 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 CXCL10P02778 98 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 KCNJ6P48051 423 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 NLRP5P59047 1200 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 ANAPC15P60006 121 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 ADAM17P78536 824 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 KRT76Q01546 638 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 STK3Q13188 491 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 IKBKEQ14164 716 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 ELOAQ14241 798 aaKnown RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 CNKSR3Q6P9H4 555 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 CPLX2Q6PUV4 134 aaKnown RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 PLA2G4DQ86XP0 818 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 REXO1Q8N1G1 1221 aaKnown RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 PHTF2Q8N3S3 785 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 CCDC148Q8NFR7 591 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 FAM174AQ8TBP5 190 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 TNPO1Q92973 898 aaKnown RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 ITPKCQ96DU7 683 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 CNTNAP3BQ96NU0 1288 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 SLC9A7Q96T83 725 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 OCSTAMPQ9BR26 566 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 CNTNAP3Q9BZ76 1288 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 AZI2Q9H6S1 392 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 JPH1Q9HDC5 661 aaPredicted RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 SH3GLB2Q9NR46 395 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms