RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 LAMA3Q16787 3333 aa18.07■□□□□ 0.48
LITAF-210ENST00000571976 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.06■□□□□ 0.48
LITAF-210ENST00000571976 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.06■□□□□ 0.48
LITAF-210ENST00000571976 VTNP04004 478 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 GHRP10912 638 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 CCT6AP40227 531 aaKnown RBP18.06■□□□□ 0.48
LITAF-210ENST00000571976 POLGP54098 1239 aaPredicted RBP18.06■□□□□ 0.48
LITAF-210ENST00000571976 CDC42EP1Q00587 391 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 LPIN1Q14693 890 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 TSHZ1Q6ZSZ6 1077 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 TET1Q8NFU7 2136 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 APBB2Q92870 758 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 IFIH1Q9BYX4 1025 aaKnown RBP18.06■□□□□ 0.48
LITAF-210ENST00000571976 OSBPL7Q9BZF2 842 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 DHX33Q9H6R0 707 aaKnown RBP18.06■□□□□ 0.48
LITAF-210ENST00000571976 EVPLQ92817 2033 aa18.06■□□□□ 0.48
LITAF-210ENST00000571976 VWA3AA6NCI4 1184 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 GAS2O43903 313 aaKnown RBP18.05■□□□□ 0.48
LITAF-210ENST00000571976 ZSCAN22P10073 491 aaPredicted RBP18.05■□□□□ 0.48
LITAF-210ENST00000571976 RARRES1P49788 294 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
LITAF-210ENST00000571976 CRYBB1P53674 252 aaPredicted RBP18.05■□□□□ 0.48
LITAF-210ENST00000571976 SMAD3P84022 425 aaKnown RBP18.05■□□□□ 0.48
LITAF-210ENST00000571976 KIZQ2M2Z5 673 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 TCTN1Q2MV58 587 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 PHOSPHO2Q8TCD6 241 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 SNX29Q8TEQ0 813 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 PIGOQ8TEQ8 1089 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
LITAF-210ENST00000571976 DBR1Q9UK59 544 aaKnown RBP18.05■□□□□ 0.48
LITAF-210ENST00000571976 GINS2Q9Y248 185 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 CLIC4Q9Y696 253 aa18.05■□□□□ 0.48
LITAF-210ENST00000571976 GPR32O75388 356 aa18.04■□□□□ 0.48
LITAF-210ENST00000571976 KCNJ6P48051 423 aa18.04■□□□□ 0.48
LITAF-210ENST00000571976 NLRP11P59045 1033 aaKnown RBP18.04■□□□□ 0.48
LITAF-210ENST00000571976 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
LITAF-210ENST00000571976 POTEGQ6S5H5 508 aa18.04■□□□□ 0.48
LITAF-210ENST00000571976 FAM43BQ6ZT52 329 aaPredicted RBP18.04■□□□□ 0.48
LITAF-210ENST00000571976 AK8Q96MA6 479 aa18.04■□□□□ 0.48
LITAF-210ENST00000571976 CDHR5Q9HBB8 845 aa18.04■□□□□ 0.48
LITAF-210ENST00000571976 SUCLA2Q9P2R7 463 aaPredicted RBP18.04■□□□□ 0.48
LITAF-210ENST00000571976 PP2D1A8MPX8 630 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 SOX1O00570 391 aaPredicted RBP18.03■□□□□ 0.48
LITAF-210ENST00000571976 DGAT1O75907 488 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
LITAF-210ENST00000571976 CDC25AP30304 524 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 GPC3P51654 580 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
LITAF-210ENST00000571976 DRP2Q13474 957 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 PTPAQ15257 358 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 ECM1Q16610 540 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 ODR4Q5SWX8 454 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 SLC9A7Q96T83 725 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 MTRQ99707 1265 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 ADAMTS10Q9H324 1103 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 AGO3Q9H9G7 860 aaKnown RBP18.03■□□□□ 0.48
LITAF-210ENST00000571976 PADI3Q9ULW8 664 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 KIAA1024Q9UPX6 916 aa18.03■□□□□ 0.48
LITAF-210ENST00000571976 LAMA2P24043 3122 aaKnown RBP18.03■□□□□ 0.48
LITAF-210ENST00000571976 A0A087WWV3 80 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 RPS6KA5O75582 802 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 F13A1P00488 732 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 CD52P31358 61 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 LONP1P36776 959 aaKnown RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 CEBPZQ03701 1054 aaKnown RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 PAK2Q13177 524 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 EMC2Q15006 297 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 FOXD4L5Q5VV16 416 aaPredicted RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 FAM109BQ6ICB4 259 aaPredicted RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 PSPC1Q8WXF1 523 aaKnown RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 FOXD4L4Q8WXT5 416 aaPredicted RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 LRCH3Q96II8 777 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 ZNF396Q96N95 335 aaPredicted RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 USP28Q96RU2 1077 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 PPP1R16BQ96T49 567 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 OSMRQ99650 979 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 MMTAG2Q9BU76 263 aaKnown RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 FTHL17Q9BXU8 183 aa18.02■□□□□ 0.48
LITAF-210ENST00000571976 DDX19AQ9NUU7 478 aaKnown RBP18.02■□□□□ 0.48
LITAF-210ENST00000571976 SIP14410 1827 aa18.02■□□□□ 0.47
LITAF-210ENST00000571976 ARHGEF35A5YM69 484 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 GPR182O15218 404 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 ASAP2O43150 1006 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 SLC26A4O43511 780 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 EIF4BP23588 611 aaKnown RBP18.01■□□□□ 0.47
LITAF-210ENST00000571976 PKP1Q13835 747 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 SLC39A14Q15043 492 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 HYIQ5T013 277 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 ZNF410Q86VK4 478 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 RHPN2Q8IUC4 686 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 TMEM40Q8WWA1 233 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
LITAF-210ENST00000571976 NLRP7Q8WX94 980 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 TMEM143Q96AN5 459 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 SCLT1Q96NL6 688 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms