RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RNF219Q5W0B1 726 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 AP1ARQ63HQ0 302 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 PDE12Q6L8Q7 609 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 CRTC1Q6UUV9 634 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 TPTE2Q6XPS3 522 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 DEFB132Q7Z7B7 95 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 FCHSD1Q86WN1 690 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 LRRC49Q8IUZ0 686 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CCDC83Q8IWF9 413 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CARNMT1Q8N4J0 409 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CNBD1Q8NA66 436 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 DRAXINQ8NBI3 349 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 LILRB1Q8NHL6 650 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 PARD3BQ8TEW8 1205 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 ZNF384Q8TF68 577 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CTNNBL1Q8WYA6 563 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 DPF3Q92784 378 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 UPF1Q92900 1129 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMG6-208ENST00000570874 DDX11Q96FC9 970 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 NAF1Q96HR8 494 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 CLMNQ96JQ2 1002 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 FAM84BQ96KN1 310 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 CNDP2Q96KP4 475 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 RMDN3Q96TC7 470 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 BAG1Q99933 345 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 HINFPQ9BQA5 517 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 ADPGKQ9BRR6 497 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 SLC39A3Q9BRY0 314 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 SLC26A6Q9BXS9 759 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 ARMT1Q9H993 441 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 MED4Q9NPJ6 270 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 INCENPQ9NQS7 918 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 STARD7Q9NQZ5 370 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 AAASQ9NRG9 546 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 PAPOLBQ9NRJ5 636 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 TRMT13Q9NUP7 481 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 ABCF3Q9NUQ8 709 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 GIMAP2Q9UG22 337 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 ZNF112Q9UJU3 913 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 KIAA1024Q9UPX6 916 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 C2CD2Q9Y426 696 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 MTF2Q9Y483 593 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 EPN1Q9Y6I3 576 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 SLC30A1Q9Y6M5 507 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 DDX49Q9Y6V7 483 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 COL11A1P12107 1806 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 PARP14Q460N5 1801 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 ZNF804BA4D1E1 1349 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 FRMPD2Q68DX3 1309 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 COL4A5P29400 1685 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 SERTM1A2A2V5 107 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CCDC66A2RUB6 948 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 E7EWF7 191 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 SMAD7O15105 426 aaKnown RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 PLSCR1O15162 318 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 NCAM2O15394 837 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 KPNA6O60684 536 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 TNFRSF21O75509 655 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 RFPL3O75679 317 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 EYA4O95677 639 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 APBB3O95704 486 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CAPNS1P04632 268 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CYP11A1P05108 521 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 UQCRFS1P1P0C7P4 283 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 FDX1P10109 184 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 WEE1P30291 646 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 USP8P40818 1118 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CD86P42081 329 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 STAT1P42224 750 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 ECE1P42892 770 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 PMS1P54277 932 aaKnown RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 PRSS12P56730 875 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 DYNLL1P63167 89 aaKnown RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 SLC7A5Q01650 507 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 NSUN2Q08J23 767 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMG6-208ENST00000570874 CCDC173Q0VFZ6 552 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 TRDNQ13061 729 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 GRAPQ13588 217 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 GRM3Q14832 879 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 ATP13A4Q4VNC1 1196 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 ANKRD39Q53RE8 183 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 HS1BP3Q53T59 392 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 PRR16Q569H4 304 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 MUM1L1Q5H9M0 696 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 TMEM67Q5HYA8 995 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 TJAP1Q5JTD0 557 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 SLC9C2Q5TAH2 1124 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 CNSTQ6PJW8 725 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 BLOC1S2Q6QNY1 142 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 KDELC1Q6UW63 502 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 Q6ZUG5 572 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 RAPH1Q70E73 1250 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 RALYLQ86SE5 291 aaKnown RBP3.92□□□□□ -1.78
SMG6-208ENST00000570874 SAPCD2Q86UD0 394 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 RAB11FIP4Q86YS3 637 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 GALNT13Q8IUC8 556 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 TBC1D10CQ8IV04 446 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 TPH2Q8IWU9 490 aa3.92□□□□□ -1.78
SMG6-208ENST00000570874 LCORLQ8N3X6 602 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms