RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 ADGRA3Q8IWK6 1321 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 LOXHD1Q8IVV2 1947 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 DDX11L8A8MPP1 907 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 TBX3O15119 743 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 RPS6KA5O75582 802 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 DGKIO75912 1065 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 IBSPP21815 317 aaPredicted RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 FGFR4P22455 802 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 SARSP49591 514 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 RBM25P49756 843 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 GPC3P51654 580 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 NPEPPSP55786 919 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 NLRP11P59045 1033 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 PSMC5P62195 406 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 TFF2Q03403 129 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 SPIRE1Q08AE8 756 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 GPM6BQ13491 265 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 DSC3Q14574 896 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 PAN2Q504Q3 1202 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 XKR3Q5GH77 459 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 NCAPH2Q6IBW4 605 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 ANO5Q75V66 913 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 NPAS4Q8IUM7 802 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 TMEM192Q8IY95 271 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 FIBCD1Q8N539 461 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 ZNF579Q8NAF0 562 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 DYDC2Q96IM9 177 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 SAMD11Q96NU1 681 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 NAP1L4Q99733 375 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 ADAM2Q99965 735 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 FTHL17Q9BXU8 183 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 TMEM60Q9H2L4 133 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 BRMS1Q9HCU9 246 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 RGS18Q9NS28 235 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 RGL1Q9NZL6 768 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 LMCD1Q9NZU5 365 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 THEGQ9P2T0 379 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 AKT3Q9Y243 479 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 MRPL42Q9Y6G3 142 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 PRRC2BQ5JSZ5 2229 aaKnown RBP6.08□□□□□ -1.44
CHD3-212ENST00000570758 CDH23Q9H251 3354 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 TTC3P53804 2025 aa6.08□□□□□ -1.44
CHD3-212ENST00000570758 IGKV6-21A0A0C4DH24 114 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 C9IYK1 514 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 H3BNC9 293 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 ZBTB39O15060 712 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 GPR182O15218 404 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 GRM6O15303 877 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 MARCH6O60337 910 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 CSDE1O75534 798 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 CD2BP2O95400 341 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 DARSP14868 501 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 TMOD1P28289 359 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 CTNNB1P35222 781 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 BMPR1AP36894 532 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 QARSP47897 775 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 FAM189BP81408 668 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 TBC1D8BQ0IIM8 1120 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 TRIM29Q14134 588 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 BTG3Q14201 252 aaPredicted RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 CTTNQ14247 550 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 EPHA7Q15375 998 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 SKIV2LQ15477 1246 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 CALCRLQ16602 461 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 TJAP1Q5JTD0 557 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 SLFN12Q8IYM2 578 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 CMTR2Q8IYT2 770 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 ATXN2LQ8WWM7 1075 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 CLP1Q92989 425 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 C8orf76Q96K31 380 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 ZSCAN31Q96LW9 406 aaPredicted RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 ASB2Q96Q27 587 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 MTMR9Q96QG7 549 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 MAP7D2Q96T17 732 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 LLPHQ9BRT6 129 aaKnown RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 SH2B1Q9NRF2 756 aaPredicted RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 RNF19AQ9NV58 838 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 SUCLA2Q9P2R7 463 aaPredicted RBP6.07□□□□□ -1.44
CHD3-212ENST00000570758 HCSTQ9UBK5 93 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 CHD9Q3L8U1 2897 aa6.07□□□□□ -1.44
CHD3-212ENST00000570758 A0A087WWV3 80 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 A0A087WZ62 844 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 DENND3A2RUS2 1198 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 C5orf67F2Z3F1 127 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 NEMFO60524 1076 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 MAFO75444 373 aaPredicted RBP6.06□□□□□ -1.44
CHD3-212ENST00000570758 SLITRK3O94933 977 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 BAG4O95429 457 aaKnown RBP6.06□□□□□ -1.44
CHD3-212ENST00000570758 RB1P06400 928 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 P4HBP07237 508 aaKnown RBP6.06□□□□□ -1.44
CHD3-212ENST00000570758 STAG3L1P0CL83 205 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 FGFR1P11362 822 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 ATP2B1P20020 1258 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 EIF4BP23588 611 aaKnown RBP6.06□□□□□ -1.44
CHD3-212ENST00000570758 DNAJB1P25685 340 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 MCM7P33993 719 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 KCNQ1P51787 676 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 MRPS5P82675 430 aaKnown RBP6.06□□□□□ -1.44
CHD3-212ENST00000570758 CYP4A11Q02928 519 aa6.06□□□□□ -1.44
CHD3-212ENST00000570758 RABEP1Q15276 862 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms