RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 ZNF444Q8N0Y2 327 aaPredicted RBP6.94□□□□□ -1.3
CDH13-212ENST00000569144 STK11IPQ8N1F8 1099 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 TMEM57Q8N5G2 664 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 GOLGA6L1Q8N7Z2 621 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 DBF4BQ8NFT6 615 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 MSLNLQ96KJ4 702 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 SLC30A3Q99726 388 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 C11orf84Q9BUA3 381 aaPredicted RBP6.94□□□□□ -1.3
CDH13-212ENST00000569144 HDAC6Q9UBN7 1215 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 GDF2Q9UK05 429 aaPredicted RBP6.94□□□□□ -1.3
CDH13-212ENST00000569144 EXOC6BQ9Y2D4 811 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 DMDP11532 3685 aa6.94□□□□□ -1.3
CDH13-212ENST00000569144 ZFHX2Q9C0A1 2572 aaPredicted RBP6.94□□□□□ -1.3
CDH13-212ENST00000569144 LCTP09848 1927 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 NFIBO00712 420 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 GRM6O15303 877 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 LINC01565O15544 149 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 ARIH2O95376 493 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 MMP1P03956 469 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 CHGBP05060 677 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 EPB42P16452 691 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 CASTP20810 708 aaKnown RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 MCCP23508 829 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 ICAM3P32942 547 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 CTNNB1P35222 781 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDH13-212ENST00000569144 NDUFV1P49821 464 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 RRP1P56182 461 aaKnown RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 PCBP4P57723 403 aaKnown RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 PDE4CQ08493 712 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 COASYQ13057 564 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 ZNF468Q5VIY5 522 aaPredicted RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 MCTP2Q6DN12 878 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 RCSD1Q6JBY9 416 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 B4GALNT3Q6L9W6 998 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 ZSCAN25Q6NSZ9 544 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 CCDC62Q6P9F0 684 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 RAB44Q7Z6P3 723 aaPredicted RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 ETFBKMTQ8IXQ9 262 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 CLASRPQ8N2M8 674 aaKnown RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 FIBCD1Q8N539 461 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 C7orf31Q8N865 590 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 SMRP1Q8NCR6 262 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 DNERQ8NFT8 737 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 NEDD1Q8NHV4 660 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 AFG1LQ8WV93 481 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 FRAT1Q92837 279 aaPredicted RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 WNT8BQ93098 351 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 NKD2Q969F2 451 aaPredicted RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 PPP2R3CQ969Q6 453 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 KATNAL1Q9BW62 490 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 PHF7Q9BWX1 381 aaPredicted RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 PUS7LQ9H0K6 701 aaKnown RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 RANBP17Q9H2T7 1088 aaKnown RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 IGFLR1Q9H665 355 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 IL1RAPL2Q9NP60 686 aa6.93□□□□□ -1.3
CDH13-212ENST00000569144 DNMT3AQ9Y6K1 912 aaPredicted RBP6.93□□□□□ -1.3
CDH13-212ENST00000569144 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.92□□□□□ -1.3
CDH13-212ENST00000569144 MED19A0JLT2 244 aaPredicted RBP6.92□□□□□ -1.3
CDH13-212ENST00000569144 GSG1L2A8MUP6 293 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 RSPH10B2B2RC85 870 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 B4DLN1 442 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 HAS3O00219 553 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 OIP5O43482 229 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 PRDM1O75626 825 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 F2P00734 622 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 GH1P01241 217 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 IFIT2P09913 472 aaKnown RBP6.92□□□□□ -1.3
CDH13-212ENST00000569144 LINC00271P0C7V0 271 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 RSPH10BP0C881 870 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 TSPY3P0CV98 308 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 TSPY8P0CW00 308 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 CALML3P27482 149 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 ADH6P28332 368 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
CDH13-212ENST00000569144 BMPR1AP36894 532 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 MRPL12P52815 198 aaKnown RBP6.92□□□□□ -1.3
CDH13-212ENST00000569144 ARHGAP1Q07960 439 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 DGKDQ16760 1214 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 PTPN21Q16825 1174 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 HSP90AB4PQ58FF6 505 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 FAM26DQ5JW98 314 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 CEP85Q6P2H3 762 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 SLCO4C1Q6ZQN7 724 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 RNF207Q6ZRF8 634 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 SYT9Q86SS6 491 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 ADSSL1Q8N142 457 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 SEPT8Q92599 483 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 IL17RAQ96F46 866 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 RIPOR3Q96MK2 946 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 STRBPQ96SI9 672 aaKnown RBP6.92□□□□□ -1.3
CDH13-212ENST00000569144 IFIH1Q9BYX4 1025 aaKnown RBP6.92□□□□□ -1.3
CDH13-212ENST00000569144 BOLA2Q9H3K6 86 aa6.92□□□□□ -1.3
CDH13-212ENST00000569144 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms