RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TMTC2Q8N394 836 aa14.23□□□□□ -0.13
SNX29-207ENST00000568949 RUFY2Q8WXA3 655 aa14.23□□□□□ -0.13
SNX29-207ENST00000568949 NKD2Q969F2 451 aaPredicted RBP14.23□□□□□ -0.13
SNX29-207ENST00000568949 ZNF558Q96NG5 402 aa14.23□□□□□ -0.13
SNX29-207ENST00000568949 MYL10Q9BUA6 226 aa14.23□□□□□ -0.13
SNX29-207ENST00000568949 LY9Q9HBG7 655 aa14.23□□□□□ -0.13
SNX29-207ENST00000568949 HCFC2Q9Y5Z7 792 aa14.23□□□□□ -0.13
SNX29-207ENST00000568949 TAF6LQ9Y6J9 622 aa14.23□□□□□ -0.13
SNX29-207ENST00000568949 ITGB3BPQ13352 177 aaPredicted RBP14.22□□□□□ -0.13
SNX29-207ENST00000568949 SMC1AQ14683 1233 aaKnown RBP14.22□□□□□ -0.13
SNX29-207ENST00000568949 FAM160B1Q5W0V3 765 aa14.22□□□□□ -0.13
SNX29-207ENST00000568949 LRRC55Q6ZSA7 311 aa14.22□□□□□ -0.13
SNX29-207ENST00000568949 FAM228AQ86W67 206 aa14.22□□□□□ -0.13
SNX29-207ENST00000568949 LRRC43Q8N309 656 aa14.22□□□□□ -0.13
SNX29-207ENST00000568949 MRPL43Q8N983 215 aaKnown RBP14.22□□□□□ -0.13
SNX29-207ENST00000568949 CYP2W1Q8TAV3 490 aa14.22□□□□□ -0.13
SNX29-207ENST00000568949 CASD1Q96PB1 797 aa14.22□□□□□ -0.13
SNX29-207ENST00000568949 AGO4Q9HCK5 861 aaKnown RBP14.22□□□□□ -0.13
SNX29-207ENST00000568949 SPG21Q9NZD8 308 aa14.22□□□□□ -0.13
SNX29-207ENST00000568949 C2orf71A6NGG8 1288 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 CLASP2O75122 1294 aaKnown RBP14.21□□□□□ -0.13
SNX29-207ENST00000568949 ARP10275 920 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 ID4P47928 161 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 CEP55Q53EZ4 464 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 ABHD15Q6UXT9 468 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 FRMD5Q7Z6J6 570 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 ABI1Q8IZP0 508 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 MFSD1Q9H3U5 465 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 RNF19AQ9NV58 838 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 CDH22Q9UJ99 828 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 USTQ9Y2C2 406 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 CACNA1AO00555 2505 aa14.21□□□□□ -0.13
SNX29-207ENST00000568949 ZBTB42B2RXF5 422 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 MEIS1O00470 390 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 BACH1O14867 736 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 GPR32O75388 356 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 CCNE2O96020 404 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 FOSP01100 380 aaPredicted RBP14.2□□□□□ -0.14
SNX29-207ENST00000568949 IGHDP01880 384 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 CALM1P0DP23 149 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 CALM2P0DP24 149 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 CALM3P0DP25 149 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 BMS1Q14692 1282 aaKnown RBP14.2□□□□□ -0.14
SNX29-207ENST00000568949 KIZQ2M2Z5 673 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 KIAA1841Q6NSI8 718 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 PDXDC2PQ6P474 469 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 CASC1Q6TDU7 716 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 ADSSL1Q8N142 457 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 SLC39A11Q8N1S5 342 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 TDRD5Q8NAT2 981 aaKnown RBP14.2□□□□□ -0.14
SNX29-207ENST00000568949 OSMRQ99650 979 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 DZANK1Q9NVP4 752 aa14.2□□□□□ -0.14
SNX29-207ENST00000568949 MYH9P35579 1960 aaKnown RBP14.2□□□□□ -0.14
SNX29-207ENST00000568949 EP300Q09472 2414 aaPredicted RBP14.2□□□□□ -0.14
SNX29-207ENST00000568949 CCDC69A6NI79 296 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 C22orf31O95567 290 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 ASGR2P07307 311 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 ZSCAN20P17040 1043 aaPredicted RBP14.19□□□□□ -0.14
SNX29-207ENST00000568949 ATAT1Q5SQI0 421 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 NFXL1Q6ZNB6 911 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 NIPA1Q7RTP0 329 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 ECHDC2Q86YB7 292 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 CCDC60Q8IWA6 550 aaPredicted RBP14.19□□□□□ -0.14
SNX29-207ENST00000568949 CMTR1Q8N1G2 835 aaKnown RBP14.19□□□□□ -0.14
SNX29-207ENST00000568949 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 TMEM87BQ96K49 555 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 SMOC2Q9H3U7 446 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 ZNF302Q9NR11 478 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 LIMD1Q9UGP4 676 aa14.19□□□□□ -0.14
SNX29-207ENST00000568949 hCG_1642624A0A1W2PR95 340 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 SH2B2O14492 632 aaPredicted RBP14.18□□□□□ -0.14
SNX29-207ENST00000568949 PRC1O43663 620 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 CHMLP26374 656 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 PBX3P40426 434 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 LIFRP42702 1097 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 RARS2Q5T160 578 aaKnown RBP14.18□□□□□ -0.14
SNX29-207ENST00000568949 MIS18BP1Q6P0N0 1132 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 TMTC3Q6ZXV5 915 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 BBXQ8WY36 941 aaPredicted RBP14.18□□□□□ -0.14
SNX29-207ENST00000568949 PPP1R16BQ96T49 567 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 RIC8AQ9NPQ8 531 aa14.18□□□□□ -0.14
SNX29-207ENST00000568949 CARNS1A5YM72 827 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 MAGEB2O15479 319 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 CXCL14O95715 111 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 EOMESO95936 686 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 VTNP04004 478 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 WEE2P0C1S8 567 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 GSPT1P15170 499 aaKnown RBP14.17□□□□□ -0.14
SNX29-207ENST00000568949 RXRAP19793 462 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 ATP4AP20648 1035 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 MCM5P33992 734 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 SREBF1P36956 1147 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 GIT2Q14161 759 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 CWF19L1Q69YN2 538 aaKnown RBP14.17□□□□□ -0.14
SNX29-207ENST00000568949 SWSAP1Q6NVH7 229 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 PPP1R18Q6NYC8 613 aa14.17□□□□□ -0.14
SNX29-207ENST00000568949 METTL13Q8N6R0 699 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms