RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	GJA10	Q969M2	543 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	PPP1R16B	Q96T49	567 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	NIFK	Q9BYG3	293 aa	Known RBP	11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	KCNMB3	Q9NPA1	279 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	C1orf112	Q9NSG2	853 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	NOL7	Q9UMY1	257 aa	Known RBP	11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	PPME1	Q9Y570	386 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	RFXAP	O00287	272 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	EDIL3	O43854	480 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	DTNB	O60941	627 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	ATP2B1	P20020	1258 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	POU3F3	P20264	500 aa	Predicted RBP	11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	CLCN3	P51790	818 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	GUCY1B3	Q02153	619 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	ADGRE1	Q14246	886 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	EPHA7	Q15375	998 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	TMEM266	Q2M3C6	531 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	POTED	Q86YR6	584 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	NPAS4	Q8IUM7	802 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	LRRC71	Q8N4P6	559 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	CEP170P1	Q96L14	293 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	OSMR	Q99650	979 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	FOXP1	Q9H334	677 aa	Predicted RBP	11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	ZSWIM4	Q9H7M6	989 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	AGO3	Q9H9G7	860 aa	Known RBP	11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	THEG	Q9P2T0	379 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	ST3GAL5	Q9UNP4	418 aa		11.62	□□□□□ -0.55
UBR1-207	ENST00000568782	ADGRA3	Q8IWK6	1321 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	ZBTB42	B2RXF5	422 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	GAS2	O43903	313 aa	Known RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	ZNF862	O60290	1169 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	RB1	P06400	928 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	EIF4B	P23588	611 aa	Known RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	CTNNB1	P35222	781 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	TXK	P42681	527 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	POLG	P54098	1239 aa	Predicted RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	GRB10	Q13322	594 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	MKRN4P	Q13434	485 aa	Predicted RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	GPM6B	Q13491	265 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	UGCG	Q16739	394 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	EPC2	Q52LR7	807 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	SPOUT1	Q5T280	376 aa	Known RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	SLC24A5	Q71RS6	500 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	TPH2	Q8IWU9	490 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	TMEM192	Q8IY95	271 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	ABI1	Q8IZP0	508 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	ERMN	Q8TAM6	284 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	NEK9	Q8TD19	979 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	SP7	Q8TDD2	431 aa	Predicted RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	TCP11	Q8WWU5	503 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	ADAM2	Q99965	735 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	OSBPL7	Q9BZF2	842 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	TTC12	Q9H892	705 aa	Predicted RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	AAAS	Q9NRG9	546 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	DACT1	Q9NYF0	836 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	NOC2L	Q9Y3T9	749 aa	Known RBP	11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	MTCH2	Q9Y6C9	303 aa		11.61	□□□□□ -0.55
UBR1-207	ENST00000568782	HOXA2	O43364	376 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	MAF	O75444	373 aa	Predicted RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	SFPQ	P23246	707 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	YWHAB	P31946	246 aa	Known RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	MCM7	P33993	719 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	RFC5	P40937	340 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	SARS	P49591	514 aa	Known RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	MRPS5	P82675	430 aa	Known RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	NCBP1	Q09161	790 aa	Known RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	ORC2	Q13416	577 aa	Predicted RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	XKR9	Q5GH70	373 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	B3GNT9	Q6UX72	402 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	RHPN2	Q8IUC4	686 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	C4orf19	Q8IY42	314 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	CMTR2	Q8IYT2	770 aa	Known RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	FBXO18	Q8NFZ0	1043 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	GDPD5	Q8WTR4	605 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	HAS1	Q92839	578 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	LXN	Q9BS40	222 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	C17orf80	Q9BSJ5	609 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	RAB34	Q9BZG1	259 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	ATP6V0A4	Q9HBG4	840 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	ERVK-5	Q9HDB9	667 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	CYP26B1	Q9NR63	512 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	RGS18	Q9NS28	235 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	VAV3	Q9UKW4	847 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	COG5	Q9UP83	839 aa		11.6	□□□□□ -0.55
UBR1-207	ENST00000568782	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.6	□□□□□ -0.55
UBR1-207	ENST00000568782		H3BNC9	293 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782		H3BQV1	296 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	EML1	O00423	815 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	ASAP2	O43150	1006 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	GPR32	O75388	356 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	DGKI	O75912	1065 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	SKI	P12755	728 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	TRAPPC10	P48553	1259 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	GPC3	P51654	580 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	CYP4A11	Q02928	519 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	TARBP2	Q15633	366 aa	Known RBP	11.59	□□□□□ -0.55

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