RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 DBF4BQ8NFT6 615 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 NEK9Q8TD19 979 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 ARNTL2Q8WYA1 636 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 TMEM60Q9H2L4 133 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 UNC45AQ9H3U1 944 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 NRBP2Q9NSY0 501 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 SETD4Q9NVD3 440 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 SAMM50Q9Y512 469 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 MTCH2Q9Y6C9 303 aa12.4□□□□□ -0.42
LINC01228-201ENST00000567966 VCANP13611 3396 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 RRN3P2A6NIE6 340 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 WNT7AO00755 349 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 BACH1O14867 736 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 SLC26A4O43511 780 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 PARNO95453 639 aaKnown RBP12.39□□□□□ -0.43
LINC01228-201ENST00000567966 F13A1P00488 732 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
LINC01228-201ENST00000567966 XRCC6P12956 609 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01228-201ENST00000567966 ADAM17P78536 824 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 SPIRE1Q08AE8 756 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 MIER3Q7Z3K6 550 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 FAM167AQ96KS9 214 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 PCYT2Q99447 389 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 HSD17B14Q9BPX1 270 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 ZNF302Q9NR11 478 aa12.39□□□□□ -0.43
LINC01228-201ENST00000567966 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 NRCAMQ92823 1304 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 RSPH10B2B2RC85 870 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
LINC01228-201ENST00000567966 HBP1O60381 514 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
LINC01228-201ENST00000567966 CTSHP09668 335 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 RSPH10BP0C881 870 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 QARSP47897 775 aaKnown RBP12.38□□□□□ -0.43
LINC01228-201ENST00000567966 PSMC5P62195 406 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 IKBKEQ14164 716 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 SLC39A14Q15043 492 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 PLEKHG4Q58EX7 1191 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 PDXDC2PQ6P474 469 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 IGSF22Q8N9C0 903 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 ERMNQ8TAM6 284 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 AK8Q96MA6 479 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 ASB2Q96Q27 587 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 ZSWIM4Q9H7M6 989 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 THEGQ9P2T0 379 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 PPME1Q9Y570 386 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 SIP14410 1827 aa12.38□□□□□ -0.43
LINC01228-201ENST00000567966 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 LPXNO60711 386 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 LYPLA2O95372 231 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 GJB5O95377 273 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 POU3F3P20264 500 aaPredicted RBP12.37□□□□□ -0.43
LINC01228-201ENST00000567966 TECP42680 631 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
LINC01228-201ENST00000567966 TFF2Q03403 129 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 GRB10Q13322 594 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 SF3A1Q15459 793 aaKnown RBP12.37□□□□□ -0.43
LINC01228-201ENST00000567966 XKR3Q5GH77 459 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 ZNF484Q5JVG2 852 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 RUFY4Q6ZNE9 571 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 C4orf19Q8IY42 314 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 EXOC8Q8IYI6 725 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 ZNF710Q8N1W2 664 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 ATXN2LQ8WWM7 1075 aaKnown RBP12.37□□□□□ -0.43
LINC01228-201ENST00000567966 ZBTB10Q96DT7 871 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 POLR3CQ9BUI4 534 aaPredicted RBP12.37□□□□□ -0.43
LINC01228-201ENST00000567966 NIFKQ9BYG3 293 aaKnown RBP12.37□□□□□ -0.43
LINC01228-201ENST00000567966 TUFT1Q9NNX1 390 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 GABBR1Q9UBS5 961 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 LRWD1Q9UFC0 647 aa12.37□□□□□ -0.43
LINC01228-201ENST00000567966 LINC01553A4QN01 128 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 EML1O00423 815 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 CHMP2AO43633 222 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 SLITRK3O94933 977 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 YEATS4O95619 227 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 MARK3P27448 753 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 RPA1P27694 616 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
LINC01228-201ENST00000567966 PLCB4Q15147 1175 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 PTPAQ15257 358 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 CCDC60Q8IWA6 550 aaPredicted RBP12.36□□□□□ -0.43
LINC01228-201ENST00000567966 CKAP2LQ8IYA6 745 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 GDPD5Q8WTR4 605 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
LINC01228-201ENST00000567966 GJA10Q969M2 543 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 UIMC1Q96RL1 719 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 RAD9AQ99638 391 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 EIF2AK1Q9BQI3 630 aaKnown RBP12.36□□□□□ -0.43
LINC01228-201ENST00000567966 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 ZDHHC9Q9Y397 364 aa12.36□□□□□ -0.43
LINC01228-201ENST00000567966 SRPRBQ9Y5M8 271 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms