RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 BUB1O43683 1085 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 RANBP6O60518 1105 aaKnown RBP9.6□□□□□ -0.87
HERC2-209ENST00000567869 ITGA2BP08514 1039 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 SMARCA1P28370 1054 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 CYLC1P35663 651 aaPredicted RBP9.6□□□□□ -0.87
HERC2-209ENST00000567869 HPCAP84074 193 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 PRPF4BQ13523 1007 aaKnown RBP9.6□□□□□ -0.87
HERC2-209ENST00000567869 ATP11CQ8NB49 1132 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 TBC1D16Q8TBP0 767 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 KRT23Q9C075 422 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 ISCUQ9H1K1 167 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 CNOT10Q9H9A5 744 aaKnown RBP9.6□□□□□ -0.87
HERC2-209ENST00000567869 SWAP70Q9UH65 585 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 PNMA3Q9UL41 463 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 USP20Q9Y2K6 914 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 STK36Q9NRP7 1315 aa9.6□□□□□ -0.87
HERC2-209ENST00000567869 HEXIM1O94992 359 aaKnown RBP9.59□□□□□ -0.87
HERC2-209ENST00000567869 TOB1P50616 345 aaPredicted RBP9.59□□□□□ -0.87
HERC2-209ENST00000567869 KRT83P78385 493 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 MIGA2Q7L4E1 593 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 ZNF554Q86TJ5 538 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 LONP2Q86WA8 852 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 SAMD3Q8N6K7 520 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 FITM2Q8N6M3 262 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.59□□□□□ -0.871e-9■■■■■ 27.7
HERC2-209ENST00000567869 CCDC28BQ9BUN5 200 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 TMED5Q9Y3A6 229 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 MYH4Q9Y623 1939 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 WDR46O15213 610 aaKnown RBP9.59□□□□□ -0.87
HERC2-209ENST00000567869 PRDM1O75626 825 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 PTPREP23469 700 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 FLT3P36888 993 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 OCRLQ01968 901 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 PAK1Q13153 545 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 WTAPQ15007 396 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 TYW1BQ6NUM6 668 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 CLEC4GQ6UXB4 293 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 IQCF2Q8IXL9 164 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 KLHL7Q8IXQ5 586 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 IFNL3Q8IZI9 196 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 MYOCDQ8IZQ8 938 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 NEK9Q8TD19 979 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 DNAJC9Q8WXX5 260 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 SEC14L1Q92503 715 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 RMDN2Q96LZ7 410 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 SMC6Q96SB8 1091 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 AGPAT5Q9NUQ2 364 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 NMRK1Q9NWW6 199 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 RHBDL2Q9NX52 303 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 JAG2Q9Y219 1238 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 LRCH1Q9Y2L9 728 aa9.59□□□□□ -0.87
HERC2-209ENST00000567869 EIF3FO00303 357 aaPredicted RBP9.59□□□□□ -0.88
HERC2-209ENST00000567869 TACC1O75410 805 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 PDGFRBP09619 1106 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 TCP1P17987 556 aaKnown RBP9.59□□□□□ -0.88
HERC2-209ENST00000567869 CCNFP41002 786 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 MAGOHP61326 146 aaKnown RBP9.59□□□□□ -0.88
HERC2-209ENST00000567869 ERVK-9P63128 1117 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 PALB2Q86YC2 1186 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 LCORLQ8N3X6 602 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 MAGOHBQ96A72 148 aaKnown RBP9.59□□□□□ -0.88
HERC2-209ENST00000567869 CCDC42Q96M95 316 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 SRPK1Q96SB4 655 aaKnown RBP9.59□□□□□ -0.88
HERC2-209ENST00000567869 EPB41L4AQ9HCS5 686 aaPredicted RBP9.59□□□□□ -0.88
HERC2-209ENST00000567869 NOVA2Q9UNW9 492 aaKnown RBP9.59□□□□□ -0.88
HERC2-209ENST00000567869 MTMR7Q9Y216 660 aa9.59□□□□□ -0.88
HERC2-209ENST00000567869 RGL2O15211 777 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 RAD23BP54727 409 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 NLRP5P59047 1200 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 KLHDC7AQ5VTJ3 777 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 CGB2Q6NT52 195 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 SAPCD2Q86UD0 394 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 ARHGAP18Q8N392 663 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 SPO11Q9Y5K1 396 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 COL4A1P02462 1669 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 SPEF2Q9C093 1822 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 SMIM23A6NLE4 172 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 AKR1B10O60218 316 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 AFPP02771 609 aaKnown RBP9.58□□□□□ -0.88
HERC2-209ENST00000567869 KLRK1P26718 216 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 USP11P51784 963 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 RTN1Q16799 776 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 P3H1Q32P28 736 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 SYDE2Q5VT97 1194 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 SLC51AQ86UW1 340 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 SLC17A8Q8NDX2 589 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 LENG1Q96BZ8 264 aaPredicted RBP9.58□□□□□ -0.88
HERC2-209ENST00000567869 POLR3CQ9BUI4 534 aaPredicted RBP9.58□□□□□ -0.88
HERC2-209ENST00000567869 VCXQ9H320 206 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 TFCP2L1Q9NZI6 479 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 MINPP1Q9UNW1 487 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
HERC2-209ENST00000567869 HYOU1Q9Y4L1 999 aa9.58□□□□□ -0.88
HERC2-209ENST00000567869 A0A1W2PQC6 194 aa9.57□□□□□ -0.88
HERC2-209ENST00000567869 KANSL1LA0AUZ9 987 aa9.57□□□□□ -0.88
HERC2-209ENST00000567869 HTR3EA5X5Y0 456 aa9.57□□□□□ -0.88
HERC2-209ENST00000567869 TRIM75PA6NK02 468 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms