RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 HERC4Q5GLZ8 1057 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 DAAM2Q86T65 1068 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 VPS36Q86VN1 386 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 CCHCR1Q8TD31 782 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 ERP44Q9BS26 406 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 CNTNAP4Q9C0A0 1308 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 BAG3O95817 575 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 LDHBP07195 334 aaKnown RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 CYP11B2P19099 503 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 NR2F2P24468 414 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 CLK2P49760 499 aaKnown RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 PMS2P54278 862 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 GSTO1P78417 241 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 PPP1R18Q6NYC8 613 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 COL23A1Q86Y22 540 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 LRRC34Q8IZ02 419 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 SLC30A5Q8TAD4 765 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 OLIG1Q8TAK6 271 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 COA7Q96BR5 231 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 TMEM109Q9BVC6 243 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 UBA5Q9GZZ9 404 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 KCNMB3Q9NPA1 279 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 ARMCX3Q9UH62 379 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 DDX25Q9UHL0 483 aaKnown RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 NR2E1Q9Y466 385 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 NPHP3-ACAD11A0A0J9YXS1 232 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 USP17L5A8MUK1 530 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 E9PMD0 336 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 FGGP02679 453 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 PPATQ06203 517 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 CROCCP2Q86T23 111 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 TXNRD3Q86VQ6 643 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 GPBP1Q86WP2 473 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 NEK9Q8TD19 979 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 RNF25Q96BH1 459 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-215ENST00000566843 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.32
COMMD4-215ENST00000566843 JAG2Q9Y219 1238 aa17.02■□□□□ 0.32
COMMD4-215ENST00000566843 IBSPP21815 317 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-215ENST00000566843 WDR66Q8TBY9 1149 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 BAIAP2L1Q9UHR4 511 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 AJAP1Q9UKB5 411 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-215ENST00000566843 DAAM1Q9Y4D1 1078 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 TNRC6CQ9HCJ0 1690 aaKnown RBP17.01■□□□□ 0.31
COMMD4-215ENST00000566843 CDK5RAP2Q96SN8 1893 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 AGTP01019 485 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 ALADP13716 330 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 FERP16591 822 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 GALCP54803 685 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 DR1Q01658 176 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 DHX34Q14147 1143 aaKnown RBP17.01■□□□□ 0.31
COMMD4-215ENST00000566843 ZNF268Q14587 947 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-215ENST00000566843 ACCSLQ4AC99 568 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 TNFAIP8L3Q5GJ75 292 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 DCAF12L1Q5VU92 463 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 ZDHHC24Q6UX98 284 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 TRPM8Q7Z2W7 1104 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 MAPKAPK5Q8IW41 473 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 U2AF1L4Q8WU68 220 aaKnown RBP17.01■□□□□ 0.31
COMMD4-215ENST00000566843 CEP95Q96GE4 821 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 CARD9Q9H257 536 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 SAP30BPQ9UHR5 308 aaKnown RBP17.01■□□□□ 0.31
COMMD4-215ENST00000566843 PCDHA12Q9UN75 941 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 KIAA1024Q9UPX6 916 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
COMMD4-215ENST00000566843 BUB1BO60566 1050 aaPredicted RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 TNNI2P48788 182 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 PLS1Q14651 629 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 ARSHQ5FYA8 562 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 C6orf118Q5T5N4 469 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 DENND2CQ68D51 928 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 CHADLQ6NUI6 762 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 EPM2AIP1Q7L775 607 aaPredicted RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 FMNL3Q8IVF7 1028 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 LNX1Q8TBB1 728 aaPredicted RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 TBC1D22AQ8WUA7 517 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 RSRC1Q96IZ7 334 aaKnown RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 NAP1L3Q99457 506 aaPredicted RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 MXD3Q9BW11 206 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 TRIM31Q9BZY9 425 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17■□□□□ 0.31
COMMD4-215ENST00000566843 SAMD15Q9P1V8 674 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 TRPC6Q9Y210 931 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 LY75O60449 1722 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 KIAA0391O15091 583 aaKnown RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 TMEM253P0C7T8 217 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 GBP2P32456 591 aaPredicted RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 CLUL1Q15846 466 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 KCTD19Q17RG1 926 aaPredicted RBP17■□□□□ 0.31
COMMD4-215ENST00000566843 BTNL9Q6UXG8 535 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 RFFLQ8WZ73 363 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 SELENOSQ9BQE4 189 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 BATF3Q9NR55 127 aa17■□□□□ 0.31
COMMD4-215ENST00000566843 GTPBP10A4D1E9 387 aaKnown RBP16.99■□□□□ 0.31
COMMD4-215ENST00000566843 SPDYE3A6NKU9 549 aa16.99■□□□□ 0.31
COMMD4-215ENST00000566843 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms