RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ZBTB7AO95365 584 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 SLCO1A2P46721 670 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 QARSP47897 775 aaKnown RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 ANKS4BQ8N8V4 417 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 PACSIN1Q9BY11 444 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 PRM3Q9NNZ6 103 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 RRP15Q9Y3B9 282 aaKnown RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 MYO1FO00160 1098 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 BUB1BO60566 1050 aaPredicted RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 P4HBP07237 508 aaKnown RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 ARHGAP25P42331 645 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 NSFP46459 744 aaKnown RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 RASA3Q14644 834 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 INTS2Q9H0H0 1204 aaKnown RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 IKBKGQ9Y6K9 419 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 ATP2A1O14983 1001 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 EPHB6O15197 1021 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 ADCY8P40145 1251 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 TRIP13Q15645 432 aaPredicted RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 EDRF1Q3B7T1 1238 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 ANKRD42Q8N9B4 389 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 SAMD15Q9P1V8 674 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 AMACRQ9UHK6 382 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 SNX24Q9Y343 169 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 ZHX2Q9Y6X8 837 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 C5P01031 1676 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 ENTPD3O75355 529 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 FTLP02792 175 aaPredicted RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 VAMP7P51809 220 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 L1RE1Q9UN81 338 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 SCN11AQ9UI33 1791 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 EVI5O60447 810 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 GAS8O95995 478 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 TMOD1P28289 359 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 PIK3CAP42336 1068 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 IFNAR2P48551 515 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 EPHA7Q15375 998 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 UAP1Q16222 522 aaPredicted RBP12.54□□□□□ -0.4
CDH1-210ENST00000566612 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 HAUS6Q7Z4H7 955 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 PLAAQ9Y263 795 aa12.54□□□□□ -0.4
CDH1-210ENST00000566612 DENND3A2RUS2 1198 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 ZBTB39O15060 712 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 TBX3O15119 743 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 MAPK4P31152 587 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 GALCP54803 685 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 ADCY1Q08828 1119 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 GIT2Q14161 759 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 RINT1Q6NUQ1 792 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 WDR59Q6PJI9 974 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 NSRP1Q9H0G5 558 aaKnown RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 PCDHB4Q9Y5E5 795 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 ARFGEF2Q9Y6D5 1785 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 FAM86B1E9PN63 330 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 FAM86B2P0C5J1 330 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 CYP2C19P33261 490 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 NF2P35240 595 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 HAS1Q92839 578 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 RNF146Q9NTX7 359 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 NOVA2Q9UNW9 492 aaKnown RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 LRRIQ3A6PVS8 624 aaPredicted RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 H3BQF6 201 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 AKAP3O75969 853 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 OSTNP61366 133 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 ALS2CLQ60I27 953 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 LMBRD2Q68DH5 695 aaPredicted RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 SNRNP48Q6IEG0 339 aaKnown RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.53□□□□□ -0.4
CDH1-210ENST00000566612 GABBR1Q9UBS5 961 aa12.53□□□□□ -0.4
CDH1-210ENST00000566612 RCCD1A6NED2 376 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 A6NNZ2 444 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 ARP10275 920 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 SOX5P35711 763 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 IGBP1P78318 339 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 DR1Q01658 176 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.4
CDH1-210ENST00000566612 TUBB8Q3ZCM7 444 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.4
CDH1-210ENST00000566612 SWSAP1Q6NVH7 229 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms