RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 EVPLQ92817 2033 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 KDM3AQ9Y4C1 1321 aa29.16■■■□□ 2.26
NME3-209ENST00000566600 ZBTB39O15060 712 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 GAS2O43903 313 aaKnown RBP29.15■■■□□ 2.26
NME3-209ENST00000566600 CLCN3P51790 818 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 GPNMBQ14956 572 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 STK38Q15208 465 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 SHHQ15465 462 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 LRRC71Q8N4P6 559 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 DHX33Q9H6R0 707 aaKnown RBP29.15■■■□□ 2.26
NME3-209ENST00000566600 AKT3Q9Y243 479 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 ATP6V1DQ9Y5K8 247 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 SRPRBQ9Y5M8 271 aaKnown RBP29.15■■■□□ 2.26
NME3-209ENST00000566600 SQORQ9Y6N5 450 aa29.15■■■□□ 2.26
NME3-209ENST00000566600 PP2D1A8MPX8 630 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 RARRES1P49788 294 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 TMEM62Q0P6H9 643 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 C9orf50Q5SZB4 431 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 ZNF579Q8NAF0 562 aaKnown RBP29.14■■■□□ 2.26
NME3-209ENST00000566600 USP38Q8NB14 1042 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 VWCEQ96DN2 955 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 NT5C3AQ9H0P0 336 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 CFAP45Q9UL16 551 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 KIAA1024Q9UPX6 916 aa29.14■■■□□ 2.26
NME3-209ENST00000566600 DGAT1O75907 488 aa29.13■■■□□ 2.25
NME3-209ENST00000566600 MARCKSP29966 332 aaPredicted RBP29.13■■■□□ 2.25
NME3-209ENST00000566600 CDC25AP30304 524 aa29.13■■■□□ 2.25
NME3-209ENST00000566600 UBA7P41226 1012 aa29.13■■■□□ 2.25
NME3-209ENST00000566600 CNKSR3Q6P9H4 555 aa29.13■■■□□ 2.25
NME3-209ENST00000566600 TCP11Q8WWU5 503 aa29.13■■■□□ 2.25
NME3-209ENST00000566600 HERVK_113Q902F9 699 aa29.13■■■□□ 2.25
NME3-209ENST00000566600 CDK5RAP3Q96JB5 506 aa29.13■■■□□ 2.25
NME3-209ENST00000566600 RNPC3Q96LT9 517 aaKnown RBP29.13■■■□□ 2.25
NME3-209ENST00000566600 MMTAG2Q9BU76 263 aaKnown RBP29.13■■■□□ 2.25
NME3-209ENST00000566600 DDX19AQ9NUU7 478 aaKnown RBP29.13■■■□□ 2.25
NME3-209ENST00000566600 TFIP11Q9UBB9 837 aaKnown RBP29.13■■■□□ 2.25
NME3-209ENST00000566600 FBXO2Q9UK22 296 aaPredicted RBP29.13■■■□□ 2.25
NME3-209ENST00000566600 YEATS4O95619 227 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 EMC2Q15006 297 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 HYIQ5T013 277 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 LINC00301Q8NCQ3 95 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 SEPT8Q92599 483 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 DNM3Q9UQ16 869 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 ZDHHC9Q9Y397 364 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 ARID2Q68CP9 1835 aa29.12■■■□□ 2.25
NME3-209ENST00000566600 BAIAP3O94812 1187 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 VTNP04004 478 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 CRYBB1P53674 252 aaPredicted RBP29.11■■■□□ 2.25
NME3-209ENST00000566600 NUCB2P80303 420 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 ECM1Q16610 540 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 PLEKHG4Q58EX7 1191 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 FBXO47Q5MNV8 452 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 OTOP2Q7RTS6 562 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 CABP7Q86V35 215 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 KRI1Q8N9T8 703 aaKnown RBP29.11■■■□□ 2.25
NME3-209ENST00000566600 APBB2Q92870 758 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 CALML4Q96GE6 196 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 MTRQ99707 1265 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 ATP6V0A4Q9HBG4 840 aa29.11■■■□□ 2.25
NME3-209ENST00000566600 SUCLA2Q9P2R7 463 aaPredicted RBP29.11■■■□□ 2.25
NME3-209ENST00000566600 ARHGEF35A5YM69 484 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 SPTLC2O15270 562 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 EFCAB14O75071 495 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 PPP6R2O75170 966 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 GHRP10912 638 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 NLRP11P59045 1033 aaKnown RBP29.1■■■□□ 2.25
NME3-209ENST00000566600 MKRN4PQ13434 485 aaPredicted RBP29.1■■■□□ 2.25
NME3-209ENST00000566600 LPIN1Q14693 890 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 FOXD4L6Q3SYB3 417 aaPredicted RBP29.1■■■□□ 2.25
NME3-209ENST00000566600 FOXD4L3Q6VB84 417 aaPredicted RBP29.1■■■□□ 2.25
NME3-209ENST00000566600 TSHZ1Q6ZSZ6 1077 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 FAM43BQ6ZT52 329 aaPredicted RBP29.1■■■□□ 2.25
NME3-209ENST00000566600 GINS2Q9Y248 185 aa29.1■■■□□ 2.25
NME3-209ENST00000566600 A0A087WWV3 80 aa29.09■■■□□ 2.25
NME3-209ENST00000566600 GPR32O75388 356 aa29.09■■■□□ 2.25
NME3-209ENST00000566600 IKBKEQ14164 716 aa29.09■■■□□ 2.25
NME3-209ENST00000566600 ZRSR1Q15695 479 aaKnown RBP29.09■■■□□ 2.25
NME3-209ENST00000566600 KIZQ2M2Z5 673 aa29.09■■■□□ 2.25
NME3-209ENST00000566600 ODR4Q5SWX8 454 aa29.09■■■□□ 2.25
NME3-209ENST00000566600 RASIP1Q5U651 963 aa29.09■■■□□ 2.25
NME3-209ENST00000566600 PSPC1Q8WXF1 523 aaKnown RBP29.09■■■□□ 2.25
NME3-209ENST00000566600 IFIH1Q9BYX4 1025 aaKnown RBP29.09■■■□□ 2.25
NME3-209ENST00000566600 CSRNP2Q9H175 543 aa29.09■■■□□ 2.25
NME3-209ENST00000566600 RANBP2P49792 3224 aaKnown RBP29.08■■■□□ 2.25
NME3-209ENST00000566600 ABHD14A-ACY1A0A1B0GW23 586 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 EYA4O95677 639 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 GPC3P51654 580 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 DNM1Q05193 864 aaKnown RBP29.08■■■□□ 2.25
NME3-209ENST00000566600 GRIN1Q05586 938 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 DRP2Q13474 957 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 MCPH1Q8NEM0 835 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 DBF4BQ8NFT6 615 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 KCNG4Q8TDN1 519 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 SCLT1Q96NL6 688 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 LOXHD1Q8IVV2 1947 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 TET1Q8NFU7 2136 aa29.08■■■□□ 2.25
NME3-209ENST00000566600 ZBBXA8MT70 800 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 ASAP2O43150 1006 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 SIP14410 1827 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 TXLNAP40222 546 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms