RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TTYH3Q9C0H2 523 aa12.5□□□□□ -0.41
LINC00562-201ENST00000566385 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
LINC00562-201ENST00000566385 SEL1LQ9UBV2 794 aa12.5□□□□□ -0.41
LINC00562-201ENST00000566385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00562-201ENST00000566385 MAFBQ9Y5Q3 323 aaPredicted RBP12.5□□□□□ -0.41
LINC00562-201ENST00000566385 PLXNB2O15031 1838 aa12.5□□□□□ -0.41
LINC00562-201ENST00000566385 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 K7ENM7 598 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
LINC00562-201ENST00000566385 CETN3O15182 167 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 EIF3DO15371 548 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00562-201ENST00000566385 SLC16A4O15374 487 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 STX10O60499 249 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 NR3C1P04150 777 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 PLS3P13797 630 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 GJC2Q5T442 439 aaPredicted RBP12.49□□□□□ -0.41
LINC00562-201ENST00000566385 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 MIS18BP1Q6P0N0 1132 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 TOGARAM2Q6ZUX3 1019 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 SHCBP1Q8NEM2 672 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 XPNPEP1Q9NQW7 623 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 LARSQ9P2J5 1176 aaKnown RBP12.49□□□□□ -0.41
LINC00562-201ENST00000566385 SIK3Q9Y2K2 1263 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 IGSF9BQ9UPX0 1349 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00562-201ENST00000566385 ZNF157P51786 506 aaPredicted RBP12.49□□□□□ -0.41
LINC00562-201ENST00000566385 KCNMA1Q12791 1236 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 MTERF2Q49AM1 385 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 RAD9BQ6WBX8 426 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 TRIM50Q86XT4 487 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 CCDC112Q8NEF3 446 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 PANX2Q96RD6 677 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 ERGIC2Q96RQ1 377 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 CRACR2AQ9BSW2 395 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 DESI2Q9BSY9 194 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 ZNF302Q9NR11 478 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 CYP26B1Q9NR63 512 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 FAM207AQ9NSI2 230 aaPredicted RBP12.49□□□□□ -0.41
LINC00562-201ENST00000566385 SLC45A1Q9Y2W3 748 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
LINC00562-201ENST00000566385 TRPM7Q96QT4 1865 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 IGKV6D-21A0A0A0MT36 114 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 A0A0U1RQJ8 604 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 TPM2P07951 284 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 TGFB3P10600 412 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 TRIM21P19474 475 aaKnown RBP12.48□□□□□ -0.41
LINC00562-201ENST00000566385 COPB2P35606 906 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 TCF7P36402 384 aaPredicted RBP12.48□□□□□ -0.41
LINC00562-201ENST00000566385 MARSP56192 900 aaKnown RBP12.48□□□□□ -0.41
LINC00562-201ENST00000566385 CCDC62Q6P9F0 684 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 ARMCX2Q7L311 632 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 OTUD6AQ7L8S5 288 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 CNGA4Q8IV77 575 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 ZSWIM2Q8NEG5 633 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 ATRIPQ8WXE1 791 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
LINC00562-201ENST00000566385 CHP1Q99653 195 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 MLXIPQ9HAP2 919 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 ADGRA3Q8IWK6 1321 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 ARHGAP6O43182 974 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 CALUO43852 315 aaPredicted RBP12.48□□□□□ -0.41
LINC00562-201ENST00000566385 NEDD9Q14511 834 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 ZNF792Q3KQV3 632 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 METTL7BQ6UX53 244 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 HAUS6Q7Z4H7 955 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 SAPCD2Q86UD0 394 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 PPP1R13BQ96KQ4 1090 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 AGPAT3Q9NRZ7 376 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 CPA4Q9UI42 421 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 CAPN11Q9UMQ6 739 aa12.48□□□□□ -0.41
LINC00562-201ENST00000566385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00562-201ENST00000566385 NPTX2P47972 431 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 CCNA1P78396 465 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 FKBP15Q5T1M5 1219 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 GPR142Q7Z601 462 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 RASAL3Q86YV0 1011 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 MORC4Q8TE76 937 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 DRC1Q96MC2 740 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 MMRN2Q9H8L6 949 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
LINC00562-201ENST00000566385 CCDC169A6NNP5 214 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 OATP04181 439 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 TXNP10599 105 aaKnown RBP12.47□□□□□ -0.41
LINC00562-201ENST00000566385 MARK3P27448 753 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 GCLCP48506 637 aaPredicted RBP12.47□□□□□ -0.41
LINC00562-201ENST00000566385 CYP2J2P51589 502 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 CELF3Q5SZQ8 465 aaKnown RBP12.47□□□□□ -0.41
LINC00562-201ENST00000566385 CEP89Q96ST8 783 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
LINC00562-201ENST00000566385 ARMCX3Q9UH62 379 aaPredicted RBP12.47□□□□□ -0.41
LINC00562-201ENST00000566385 LUC7L2Q9Y383 392 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms