RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 PPFIBP1Q86W92 1011 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 TMEM139Q8IV31 216 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 SLC9A9Q8IVB4 645 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 C12orf56Q8IXR9 622 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 DAW1Q8N136 415 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 GPRC5AQ8NFJ5 357 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 AFAP1L1Q8TED9 768 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 BRI3BPQ8WY22 251 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 PARK7Q99497 189 aaKnown RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 MMP19Q99542 508 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 PAGR1Q9BTK6 254 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 FGFBP2Q9BYJ0 223 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 MRPL44Q9H9J2 332 aaKnown RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 RRAGCQ9HB90 399 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 PDLIM7Q9NR12 457 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 DIS3Q9Y2L1 958 aaKnown RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 SAMM50Q9Y512 469 aa9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
LSM3P5-201ENST00000566307 MYH11P35749 1972 aa9.77□□□□□ -0.84
LSM3P5-201ENST00000566307 RSPH10B2B2RC85 870 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 KIF2AO00139 706 aaPredicted RBP9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 PDHXO00330 501 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 SOCS7O14512 581 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 MFAP3LO75121 409 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 HIP1RO75146 1068 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 DGAT1O75907 488 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 CELF2O95319 508 aaKnown RBP9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 RSPH10BP0C881 870 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 PLS3P13797 630 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 HOXD13P35453 343 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 MTIF2P46199 727 aaKnown RBP9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 UBXN1Q04323 297 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 LRRC41Q15345 812 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 FAM110CQ1W6H9 321 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 VWA3BQ502W6 1294 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 HSP90AA4PQ58FG1 418 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 FKBP15Q5T1M5 1219 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 TRIM59Q8IWR1 403 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 MYCT1Q8N699 235 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 GLIS3Q8NEA6 775 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 MCPH1Q8NEM0 835 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 KIFAP3Q92845 792 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 NTPCRQ9BSD7 190 aaKnown RBP9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 NOC4LQ9BVI4 516 aaKnown RBP9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 TTYH3Q9C0H2 523 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 VPS16Q9H269 839 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 TMEM206Q9H813 350 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 METTL14Q9HCE5 456 aaKnown RBP9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 SYNGAP1Q96PV0 1343 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 ARID2Q68CP9 1835 aa9.77□□□□□ -0.85
LSM3P5-201ENST00000566307 ZNFX1Q9P2E3 1918 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 RBM47A0AV96 593 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 H0YCG3 227 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ZBTB39O15060 712 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 MAPK13O15264 365 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ZNF862O60290 1169 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 LGR5O75473 907 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 FARP2O94887 1054 aaPredicted RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 GYPCP04921 128 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 MYBP10242 640 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 UBA1P22314 1058 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 CASP5P51878 434 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 TERF1P54274 439 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 NCKAP1LP55160 1127 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 GTF2BQ00403 316 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 CDK17Q00537 523 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ENPEPQ07075 957 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 TBC1D8BQ0IIM8 1120 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ADAM9Q13443 819 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 UGCGQ16739 394 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ZNF792Q3KQV3 632 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ODR4Q5SWX8 454 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 METTL7BQ6UX53 244 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ANO5Q75V66 913 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 FAM178BQ8IXR5 827 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 CCAR2Q8N163 923 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 MSL3Q8N5Y2 521 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 FAM167AQ96KS9 214 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 CCDC43Q96MW1 224 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 DNAJC7Q99615 494 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 BAG1Q99933 345 aaPredicted RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 NIFKQ9BYG3 293 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 NDST4Q9H3R1 872 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 DMAC2Q9NW81 257 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 GABBR1Q9UBS5 961 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 CAPN11Q9UMQ6 739 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 DAAM1Q9Y4D1 1078 aa9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
LSM3P5-201ENST00000566307 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 MYH9P35579 1960 aaKnown RBP9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 GTPBP10A4D1E9 387 aaKnown RBP9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 GOLGA6L9A6NEM1 432 aa9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 BACH1O14867 736 aa9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 TGFB1I1O43294 461 aa9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 COBLO75128 1261 aa9.75□□□□□ -0.85
LSM3P5-201ENST00000566307 PRPF6O94906 941 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms