RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 YBX3P16989 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 CASTP20810 708 aaKnown RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 TNFSF4P23510 183 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 PLIN5Q00G26 463 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 ABHD17CQ6PCB6 329 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 AGMOQ6ZNB7 445 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 ADAMTS18Q8TE60 1221 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 RUFY2Q8WXA3 655 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 RRP36Q96EU6 259 aaKnown RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 CERS4Q9HA82 394 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 INTS7Q9NVH2 962 aaKnown RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 TRMT1Q9NXH9 659 aaKnown RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 SRPK3Q9UPE1 567 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 CHD4Q14839 1912 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 HSPA4LO95757 839 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 LRRC47Q8N1G4 583 aaKnown RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 ISCA1Q9BUE6 129 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 A0A087WV62 115 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 CLTBP09497 229 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 HSD3B1P14060 373 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 BPIP17213 487 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 GALNT1Q10472 559 aaPredicted RBP11.87□□□□□ -0.51
UBFD1-205ENST00000566136 SLC9A5Q14940 896 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 ADCK5Q3MIX3 580 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 KAZNQ674X7 775 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 RUFY3Q7L099 469 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 NLRP8Q86W28 1048 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBFD1-205ENST00000566136 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 ZNF280CQ8ND82 737 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 GATAD2BQ8WXI9 593 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 KLHL6Q8WZ60 621 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.51
UBFD1-205ENST00000566136 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
UBFD1-205ENST00000566136 ELP3Q9H9T3 547 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
UBFD1-205ENST00000566136 TTLL3Q9Y4R7 772 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 DOK2O60496 412 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 TADA3O75528 432 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 PTPREP23469 700 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 PPP2R2AP63151 447 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 CLUL1Q15846 466 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 CFAP100Q494V2 611 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 HELLSQ9NRZ9 838 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 H2AFY2Q9P0M6 372 aaPredicted RBP11.87□□□□□ -0.51
UBFD1-205ENST00000566136 AASSQ9UDR5 926 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
UBFD1-205ENST00000566136 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
UBFD1-205ENST00000566136 A0A0D9SFI3 127 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.86□□□□□ -0.51
UBFD1-205ENST00000566136 AKR1B10O60218 316 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 LARGE1O95461 756 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 CD86P42081 329 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 UBXN2AP68543 259 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 AP1B1Q10567 949 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 TFCP2Q12800 502 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 SHROOM1Q2M3G4 852 aaPredicted RBP11.86□□□□□ -0.51
UBFD1-205ENST00000566136 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 HAUS3Q68CZ6 603 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 GRAMD1CQ8IYS0 662 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 SPTLC3Q9NUV7 552 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 A1BGP04217 495 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 CAP2P40123 477 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 KCNJ4P48050 445 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
UBFD1-205ENST00000566136 PDE6CP51160 858 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 MAPK10P53779 464 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 SLC12A2P55011 1212 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 IL2P60568 153 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 TRAPPC3LQ5T215 181 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 PPP1R14AQ96A00 147 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 AGO4Q9HCK5 861 aaKnown RBP11.86□□□□□ -0.51
UBFD1-205ENST00000566136 ARHGAP28Q9P2N2 729 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
UBFD1-205ENST00000566136 LCHNA4D1U4 455 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 GJB3O75712 270 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 KRT10P13645 584 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 RAG1P15918 1043 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 COL9A3Q14050 684 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 ARMC4Q5T2S8 1044 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 CLRN3Q8NCR9 226 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 ZSCAN18Q8TBC5 510 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms