RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 MCPH1Q8NEM0 835 aa20.75■□□□□ 0.91
COMMD4-213ENST00000565834 ENOX1Q8TC92 643 aaKnown RBP20.75■□□□□ 0.91
COMMD4-213ENST00000565834 DHTKD1Q96HY7 919 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-213ENST00000565834 OLFML3Q9NRN5 406 aa20.75■□□□□ 0.91
COMMD4-213ENST00000565834 ZNF215Q9UL58 517 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-213ENST00000565834 TRPC6Q9Y210 931 aa20.75■□□□□ 0.91
COMMD4-213ENST00000565834 PPME1Q9Y570 386 aa20.75■□□□□ 0.91
COMMD4-213ENST00000565834 A6NJR5 290 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 HMGCRP04035 888 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 ZNF286BP0CG31 522 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 CNGA1P29973 690 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 POLGP54098 1239 aaPredicted RBP20.74■□□□□ 0.91
COMMD4-213ENST00000565834 STX17P56962 302 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 TPM4P67936 248 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 TRIM32Q13049 653 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 NCAPHQ15003 741 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 TARBP2Q15633 366 aaKnown RBP20.74■□□□□ 0.91
COMMD4-213ENST00000565834 BRDTQ58F21 947 aaPredicted RBP20.74■□□□□ 0.91
COMMD4-213ENST00000565834 FAM102BQ5T8I3 360 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 GUF1Q8N442 669 aaKnown RBP20.74■□□□□ 0.91
COMMD4-213ENST00000565834 MRPL44Q9H9J2 332 aaKnown RBP20.74■□□□□ 0.91
COMMD4-213ENST00000565834 RWDD2AQ9UIY3 292 aa20.74■□□□□ 0.91
COMMD4-213ENST00000565834 DUSP11O75319 330 aaKnown RBP20.73■□□□□ 0.91
COMMD4-213ENST00000565834 PRKAR2AP13861 404 aaKnown RBP20.73■□□□□ 0.91
COMMD4-213ENST00000565834 RFC5P40937 340 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 CPT1AP50416 773 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 PRMT2P55345 433 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 EMC2Q15006 297 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 LRRC41Q15345 812 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 ODR4Q5SWX8 454 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 MYOCDQ8IZQ8 938 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 GLIS3Q8NEA6 775 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 C16orf70Q9BSU1 422 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 FGFBP2Q9BYJ0 223 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 PDLIM7Q9NR12 457 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 LARSQ9P2J5 1176 aaKnown RBP20.73■□□□□ 0.91
COMMD4-213ENST00000565834 SEPT4O43236 478 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 HBP1O60381 514 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 KIF20AO95235 890 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 FAM178BQ8IXR5 827 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 PXYLP1Q8TE99 480 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 SLC7A3Q8WY07 619 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 KIFAP3Q92845 792 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 MED15Q96RN5 788 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 CEP89Q96ST8 783 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 DHX33Q9H6R0 707 aaKnown RBP20.73■□□□□ 0.91
COMMD4-213ENST00000565834 GPRC5CQ9NQ84 441 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 XPNPEP1Q9NQW7 623 aa20.73■□□□□ 0.91
COMMD4-213ENST00000565834 KAT6AQ92794 2004 aa20.72■□□□□ 0.91
COMMD4-213ENST00000565834 H3BRB1 525 aa20.72■□□□□ 0.91
COMMD4-213ENST00000565834 PLS3P13797 630 aa20.72■□□□□ 0.91
COMMD4-213ENST00000565834 CCNE1P24864 410 aa20.72■□□□□ 0.91
COMMD4-213ENST00000565834 SPATA1Q5VX52 437 aa20.72■□□□□ 0.91
COMMD4-213ENST00000565834 P2RX5Q93086 422 aa20.72■□□□□ 0.91
COMMD4-213ENST00000565834 TUT1Q9H6E5 874 aaKnown RBP20.72■□□□□ 0.91
COMMD4-213ENST00000565834 NFE2L3Q9Y4A8 694 aa20.72■□□□□ 0.91
COMMD4-213ENST00000565834 BICDL2A1A5D9 508 aa20.71■□□□□ 0.91
COMMD4-213ENST00000565834 GCNT3O95395 438 aa20.71■□□□□ 0.91
COMMD4-213ENST00000565834 CASP5P51878 434 aa20.71■□□□□ 0.91
COMMD4-213ENST00000565834 TBC1D8BQ0IIM8 1120 aa20.71■□□□□ 0.91
COMMD4-213ENST00000565834 RNPEPQ9H4A4 650 aa20.71■□□□□ 0.91
COMMD4-213ENST00000565834 WBP1LQ9NX94 342 aa20.71■□□□□ 0.91
COMMD4-213ENST00000565834 ZBTB42B2RXF5 422 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 MYBP10242 640 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 RARBP10826 455 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 FSCN1Q16658 493 aaKnown RBP20.7■□□□□ 0.91
COMMD4-213ENST00000565834 TPD52L1Q16890 204 aaPredicted RBP20.7■□□□□ 0.91
COMMD4-213ENST00000565834 STXBP4Q6ZWJ1 553 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 EPM2AIP1Q7L775 607 aaPredicted RBP20.7■□□□□ 0.91
COMMD4-213ENST00000565834 EXOC8Q8IYI6 725 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 SLAIN1Q8ND83 568 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 SCFD1Q8WVM8 642 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 FIZ1Q96SL8 496 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 C17orf75Q9HAS0 396 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 TRIM17Q9Y577 477 aa20.7■□□□□ 0.91
COMMD4-213ENST00000565834 TRIM49BA6NDI0 452 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 MAFO75444 373 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-213ENST00000565834 MAPTP10636 758 aaKnown RBP20.7■□□□□ 0.9
COMMD4-213ENST00000565834 CCND3P30281 292 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-213ENST00000565834 NMT1P30419 496 aaKnown RBP20.7■□□□□ 0.9
COMMD4-213ENST00000565834 SOX10P56693 466 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 PLCB2Q00722 1185 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 ZNF484Q5JVG2 852 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 MAP3K21Q5TCX8 1036 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 CENPPQ6IPU0 288 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 ANP32BQ92688 251 aaKnown RBP20.7■□□□□ 0.9
COMMD4-213ENST00000565834 POLR3FQ9H1D9 316 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-213ENST00000565834 SPC25Q9HBM1 224 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 FANCLQ9NW38 375 aa20.7■□□□□ 0.9
COMMD4-213ENST00000565834 K7ENM7 598 aa20.69■□□□□ 0.9
COMMD4-213ENST00000565834 EIF3DO15371 548 aaKnown RBP eCLIP20.69■□□□□ 0.9
COMMD4-213ENST00000565834 PMS1P54277 932 aaKnown RBP20.69■□□□□ 0.9
COMMD4-213ENST00000565834 PEX3P56589 373 aa20.69■□□□□ 0.9
COMMD4-213ENST00000565834 GJA9P57773 515 aa20.69■□□□□ 0.9
COMMD4-213ENST00000565834 RTP1P59025 263 aa20.69■□□□□ 0.9
COMMD4-213ENST00000565834 BEX3Q00994 111 aa20.69■□□□□ 0.9
COMMD4-213ENST00000565834 DMP1Q13316 513 aaPredicted RBP20.69■□□□□ 0.9
COMMD4-213ENST00000565834 ZNF720Q7Z2F6 126 aa20.69■□□□□ 0.9
COMMD4-213ENST00000565834 NELFCDQ8IXH7 590 aa20.69■□□□□ 0.9
COMMD4-213ENST00000565834 JPH2Q9BR39 696 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms