RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CYP26B1Q9NR63 512 aa17.28■□□□□ 0.36
COMMD4-212ENST00000565517 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-212ENST00000565517 TMEM150BA6NC51 233 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 LAD1O00515 517 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 TLL1O43897 1013 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 VTNP04004 478 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 CD52P31358 61 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 YWHABP31946 246 aaKnown RBP17.27■□□□□ 0.36
COMMD4-212ENST00000565517 DNM2P50570 870 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 CYP4A11Q02928 519 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 CTTNQ14247 550 aaKnown RBP17.27■□□□□ 0.36
COMMD4-212ENST00000565517 TPH2Q8IWU9 490 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 TOP1MTQ969P6 601 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 GUCD1Q96NT3 240 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 RAD9AQ99638 391 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 ZBED2Q9BTP6 218 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 SUGCTQ9HAC7 445 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 CDHR5Q9HBB8 845 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 PADI3Q9ULW8 664 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 AKT3Q9Y243 479 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 PCDHB6Q9Y5E3 794 aa17.27■□□□□ 0.36
COMMD4-212ENST00000565517 ENPP3O14638 875 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
COMMD4-212ENST00000565517 MYOGP15173 224 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 TECP42680 631 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
COMMD4-212ENST00000565517 PAK2Q13177 524 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 PDIA5Q14554 519 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 KIZQ2M2Z5 673 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 TMEM266Q2M3C6 531 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 CEP170P1Q96L14 293 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 ADAMTS10Q9H324 1103 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 DHX33Q9H6R0 707 aaKnown RBP17.26■□□□□ 0.35
COMMD4-212ENST00000565517 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.26■□□□□ 0.35
COMMD4-212ENST00000565517 ANKEF1Q9NU02 776 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 GINS2Q9Y248 185 aa17.26■□□□□ 0.35
COMMD4-212ENST00000565517 POTEMA6NI47 508 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 GPR182O15218 404 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
COMMD4-212ENST00000565517 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 RFC5P40937 340 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 PRPHP41219 470 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 GPC3P51654 580 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 NPEPPSP55786 919 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 NLRP11P59045 1033 aaKnown RBP17.25■□□□□ 0.35
COMMD4-212ENST00000565517 PTGDRQ13258 359 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 NBR1Q14596 966 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 PLA2G4FQ68DD2 849 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 MYOCDQ8IZQ8 938 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 ERMNQ8TAM6 284 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 TMEM40Q8WWA1 233 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 SLC7A3Q8WY07 619 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-212ENST00000565517 SH2D3AQ9BRG2 576 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 POLR3CQ9BUI4 534 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-212ENST00000565517 ERVK-5Q9HDB9 667 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 STXBP5LQ9Y2K9 1186 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
COMMD4-212ENST00000565517 INSL6Q9Y581 213 aa17.25■□□□□ 0.35
COMMD4-212ENST00000565517 CA3P07451 260 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 SPATA31C1P0DKV0 1188 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 MUTP22033 750 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 EIF4BP23588 611 aaKnown RBP17.24■□□□□ 0.35
COMMD4-212ENST00000565517 RPA1P27694 616 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 HTRA4P83105 476 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-212ENST00000565517 GRIN2CQ14957 1233 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 PPP2R2DQ66LE6 453 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 TMCO2Q7Z6W1 182 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-212ENST00000565517 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
COMMD4-212ENST00000565517 OSMRQ99650 979 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 RAB34Q9BZG1 259 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 TSPYL2Q9H2G4 693 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-212ENST00000565517 STK24Q9Y6E0 443 aa17.24■□□□□ 0.35
COMMD4-212ENST00000565517 CHD9Q3L8U1 2897 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 RBAK-RBAKDNI3L0D1 243 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 ZBTB39O15060 712 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 POLGP54098 1239 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-212ENST00000565517 NFX1Q12986 1120 aaKnown RBP17.23■□□□□ 0.35
COMMD4-212ENST00000565517 DRP2Q13474 957 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 XKR9Q5GH70 373 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 RTN4RL1Q86UN2 441 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-212ENST00000565517 CATSPER3Q86XQ3 398 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 IGSF22Q8N9C0 903 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 TCP11Q8WWU5 503 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 SUCLA2Q9P2R7 463 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-212ENST00000565517 ST3GAL5Q9UNP4 418 aa17.23■□□□□ 0.35
COMMD4-212ENST00000565517 MED24O75448 989 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 DARSP14868 501 aaKnown RBP17.22■□□□□ 0.35
COMMD4-212ENST00000565517 ATP2C1P98194 919 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-212ENST00000565517 TAP1Q03518 808 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 ZNF410Q86VK4 478 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 FAM228AQ86W67 206 aa17.22■□□□□ 0.35
COMMD4-212ENST00000565517 LINC01599Q8WXQ3 324 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms