RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ABCA10Q8WWZ4 1543 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 LRRIQ4A6NIV6 560 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PMS2P54278 862 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 MAGOHP61326 146 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 HDLBPQ00341 1268 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 AARS2Q5JTZ9 985 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 SARM1Q6SZW1 724 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 FAM47EQ6ZV65 393 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 EFHBQ8N7U6 833 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 TEKT4Q8WW24 435 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PCDHGB4Q9UN71 923 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PCDHA7Q9UN72 937 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ACADSP16219 412 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 VCAM1P19320 739 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMG1-211ENST00000565324 PDCLQ13371 301 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 METTL23Q86XA0 190 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 RNF26Q9BY78 433 aaPredicted RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 FAM129AQ9BZQ8 928 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 FOXP3Q9BZS1 431 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ADAM30Q9UKF2 790 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PEG3Q9GZU2 1588 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 TOPBP1Q92547 1522 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 NFIBO00712 420 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 WASHC5Q12768 1159 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 XKR9Q5GH70 373 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 GPATCH4Q5T3I0 446 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 UHMK1Q8TAS1 419 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 FAM227BQ96M60 508 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ZSWIM6Q9HCJ5 1215 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 RHOBTB1O94844 696 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 RALBP11234 206 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 SERPINB3P29508 390 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ARFIP2P53365 341 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 SETD3Q86TU7 594 aaPredicted RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 SCFD1Q8WVM8 642 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PIK3R5Q8WYR1 880 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 TTC17Q96AE7 1141 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 FAM32AQ9Y421 112 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 PFASO15067 1338 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ZNF532Q9HCE3 1301 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ASAP2O43150 1006 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PRDM1O75626 825 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 IMPDH2P12268 514 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ITGA6P23229 1130 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PTGDRQ13258 359 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ITPRIPL1Q6GPH6 555 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 PCYOX1LQ8NBM8 494 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 B4GALNT2Q8NHY0 566 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 FAM167BQ9BTA0 163 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 SMARCAL1Q9NZC9 954 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ANP32DO95626 131 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 POLR2MP0CAP2 368 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ZSCAN20P17040 1043 aaPredicted RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 VCPP55072 806 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 TFDP2Q14188 446 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 RABGAP1LQ5R372 815 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 DCAF15Q66K64 600 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 LRRC8EQ6NSJ5 796 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 DDHD1Q8NEL9 900 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 WDR11Q9BZH6 1224 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ARMT1Q9H993 441 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ABCB6Q9NP58 842 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 ARHGEF3Q9NR81 526 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 VAMP4O75379 141 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 NAALADL2Q58DX5 795 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 BTNL9Q6UXG8 535 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 TOGARAM2Q6ZUX3 1019 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 RTL3Q8N8U3 475 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 CDC26Q8NHZ8 85 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 SLC7A3Q8WY07 619 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 MMTAG2Q9BU76 263 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 C14orf93Q9H972 538 aaKnown RBP5.42□□□□□ -1.54
SMG1-211ENST00000565324 ITM2BQ9Y287 266 aa5.42□□□□□ -1.54
SMG1-211ENST00000565324 MYH9P35579 1960 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 FTCDO95954 541 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 LDHAP00338 332 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 TRIP4Q15650 581 aaPredicted RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 WLSQ5T9L3 541 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SPATA5Q8NB90 893 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SUPT20HQ8NEM7 779 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 GPT2Q8TD30 523 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ULK4Q96C45 1275 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 THOC1Q96FV9 657 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 SNF8Q96H20 258 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 HIC2Q96JB3 615 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ZFYVE19Q96K21 471 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 PYCARDQ9ULZ3 195 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SAC3D1A6NKF1 404 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 TK2O00142 265 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KRT28Q7Z3Y7 464 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 CNBD1Q8NA66 436 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 C3orf20Q8ND61 904 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ARHGEF1Q92888 912 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 MXD3Q9BW11 206 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 FSD1LQ9BXM9 530 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KCNJ14Q9UNX9 436 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SH3TC1Q8TE82 1336 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ZMYND10O75800 440 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms