RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 FIBCD1Q8N539 461 aa16.61■□□□□ 0.25
USB1-210ENST00000565151 TEKT3Q9BXF9 490 aa16.61■□□□□ 0.25
USB1-210ENST00000565151 HCSTQ9UBK5 93 aa16.61■□□□□ 0.25
USB1-210ENST00000565151 VAV3Q9UKW4 847 aa16.61■□□□□ 0.25
USB1-210ENST00000565151 SAMM50Q9Y512 469 aa16.61■□□□□ 0.25
USB1-210ENST00000565151 C9IYK1 514 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 M0QZ92 97 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 JAK2O60674 1132 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 DNAJB1P25685 340 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 BMPR1AP36894 532 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 CRYBB1P53674 252 aaPredicted RBP16.6■□□□□ 0.25
USB1-210ENST00000565151 NR5A1Q13285 461 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 PAN2Q504Q3 1202 aaKnown RBP16.6■□□□□ 0.25
USB1-210ENST00000565151 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 EFCAB12Q6NXP0 572 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 MOXD1Q6UVY6 613 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 FAM177A1Q8N128 213 aaPredicted RBP16.6■□□□□ 0.25
USB1-210ENST00000565151 METTL13Q8N6R0 699 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 HAS1Q92839 578 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 HLA-CQ95604 372 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 SAMD11Q96NU1 681 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 FTHL17Q9BXU8 183 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 KCNMB3Q9NPA1 279 aa16.6■□□□□ 0.25
USB1-210ENST00000565151 WRAP73Q9P2S5 460 aaPredicted RBP16.6■□□□□ 0.25
USB1-210ENST00000565151 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
USB1-210ENST00000565151 DDX25Q9UHL0 483 aaKnown RBP16.6■□□□□ 0.25
USB1-210ENST00000565151 TNFRSF10AO00220 468 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 RPS6KA5O75582 802 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 CTNNB1P35222 781 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 NLRP11P59045 1033 aaKnown RBP16.59■□□□□ 0.25
USB1-210ENST00000565151 BTG3Q14201 252 aaPredicted RBP16.59■□□□□ 0.25
USB1-210ENST00000565151 LETM2Q2VYF4 491 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 TCEAL5Q5H9L2 206 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 CPLX2Q6PUV4 134 aaKnown RBP16.59■□□□□ 0.25
USB1-210ENST00000565151 KRT25Q7Z3Z0 450 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 NPAS4Q8IUM7 802 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
USB1-210ENST00000565151 NSUN7Q8NE18 718 aaKnown RBP16.59■□□□□ 0.25
USB1-210ENST00000565151 UHRF1Q96T88 793 aaPredicted RBP16.59■□□□□ 0.25
USB1-210ENST00000565151 ADAM2Q99965 735 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 NIFKQ9BYG3 293 aaKnown RBP16.59■□□□□ 0.25
USB1-210ENST00000565151 RGS18Q9NS28 235 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 RNF19AQ9NV58 838 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 COG5Q9UP83 839 aa16.59■□□□□ 0.25
USB1-210ENST00000565151 SFNP31947 248 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 JAK3P52333 1124 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 FAM189BP81408 668 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 COL19A1Q14993 1142 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 FAM102BQ5T8I3 360 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 PIK3AP1Q6ZUJ8 805 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 ANO5Q75V66 913 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 MIER3Q7Z3K6 550 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 CMTR2Q8IYT2 770 aaKnown RBP16.58■□□□□ 0.24
USB1-210ENST00000565151 BANK1Q8NDB2 785 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 KHSRPQ92945 711 aaKnown RBP eCLIP16.58■□□□□ 0.24
USB1-210ENST00000565151 FAM167AQ96KS9 214 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 KIF2CQ99661 725 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 C22orf23Q9BZE7 217 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 UBE2ZQ9H832 354 aaPredicted RBP16.58■□□□□ 0.24
USB1-210ENST00000565151 CD320Q9NPF0 282 aa16.58■□□□□ 0.24
USB1-210ENST00000565151 IGKV6-21A0A0C4DH24 114 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 MAGEB2O15479 319 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 CSDE1O75534 798 aaKnown RBP16.57■□□□□ 0.24
USB1-210ENST00000565151 CDKL5O76039 1030 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 IBSPP21815 317 aaPredicted RBP16.57■□□□□ 0.24
USB1-210ENST00000565151 FGFR4P22455 802 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.24
USB1-210ENST00000565151 SARSP49591 514 aaKnown RBP16.57■□□□□ 0.24
USB1-210ENST00000565151 GPC3P51654 580 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 NEK4P51957 841 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 SPIRE1Q08AE8 756 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 PPP4R3AQ6IN85 833 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 RDM1Q8NG50 284 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.57■□□□□ 0.24
USB1-210ENST00000565151 ALG13Q9NP73 1137 aaKnown RBP16.57■□□□□ 0.24
USB1-210ENST00000565151 NRBP2Q9NSY0 501 aa16.57■□□□□ 0.24
USB1-210ENST00000565151 RB1P06400 928 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 LTBRP36941 435 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 MTERF2Q49AM1 385 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 PLA2G4FQ68DD2 849 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 NEK8Q86SG6 692 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 SEPT9Q9UHD8 586 aaPredicted RBP16.56■□□□□ 0.24
USB1-210ENST00000565151 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 PLAGL2Q9UPG8 496 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 CEP131Q9UPN4 1083 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 AKT3Q9Y243 479 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 TRIOO75962 3097 aa16.56■□□□□ 0.24
USB1-210ENST00000565151 CCDC194A0A1B0GVG4 234 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 ZBTB39O15060 712 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 CSPG5O95196 566 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 ITGB1P05556 798 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 FGFR1P11362 822 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 KCNA5P22460 613 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 IRS1P35568 1242 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 FOSBP53539 338 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 NPEPPSP55786 919 aa16.55■□□□□ 0.24
USB1-210ENST00000565151 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
USB1-210ENST00000565151 ANKRD1Q15327 319 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms