RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PLCG2P16885 1265 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 RFC4P35249 363 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 FXR2P51116 673 aaKnown RBP eCLIP22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 PROM2Q8N271 834 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 AGAP11Q8TF27 550 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ATP8B4Q8TF62 1192 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 FAM167BQ9BTA0 163 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 UTRNP46939 3433 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 KIF1CO43896 1103 aaKnown RBP22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 MGRN1O60291 552 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 DIAPH2O60879 1101 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 LRRN2O75325 713 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 XRCC5P13010 732 aaKnown RBP22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 PMS2P54278 862 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 TRMT1LQ7Z2T5 733 aaKnown RBP22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 PALB2Q86YC2 1186 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 GDAP1Q8TB36 358 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SPZ1Q9BXG8 430 aa22.25■■□□□ 1.15
MAP1LC3B-206ENST00000564844 A0A1B0GUA9 196 aa22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 TAL1P17542 331 aaPredicted RBP22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 KCNJ1P48048 391 aa22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 FAXDC2Q96IV6 333 aa22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 KCTD10Q9H3F6 313 aa22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SNAP25P60880 206 aa22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ARHGEF26Q96DR7 871 aa22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 GGA2Q9UJY4 613 aa22.24■■□□□ 1.15
MAP1LC3B-206ENST00000564844 C5orf60A6NFR6 353 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 MARCKSL1P49006 195 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 COBLL1Q53SF7 1204 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 KCTD1Q719H9 257 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SFR1Q86XK3 245 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SWAP70Q9UH65 585 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 PNMA3Q9UL41 463 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 AFPP02771 609 aaKnown RBP22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 PSMD2Q13200 908 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SEMA3FQ13275 785 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ZNF317Q96PQ6 595 aaPredicted RBP22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 FGFR1OP2Q9NVK5 253 aa22.23■■□□□ 1.15
MAP1LC3B-206ENST00000564844 MED24O75448 989 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 CYP11B2P19099 503 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SLC8A1P32418 973 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 IFI16Q16666 785 aaKnown RBP22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SEPT14Q6ZU15 432 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 TRPM8Q7Z2W7 1104 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 CPNE8Q86YQ8 564 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 MICAL1Q8TDZ2 1067 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SPDL1Q96EA4 605 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 POP1Q99575 1024 aaKnown RBP22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 TRIM6Q9C030 488 aaPredicted RBP22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ADAM7Q9H2U9 754 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 EPB41L4BQ9H329 900 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 KCNK9Q9NPC2 374 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ABCB11O95342 1321 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 KDM4FA0A1W2PPD8 638 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 CCDC189A1A4V9 331 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 LONRF1Q17RB8 773 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 TMEM119Q4V9L6 283 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 NEK9Q8TD19 979 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ALG3Q92685 438 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 RSRC1Q96IZ7 334 aaKnown RBP22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 KDM4CQ9H3R0 1056 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 EVI5O60447 810 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 TNIP1Q15025 636 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ARSHQ5FYA8 562 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 C1orf131Q8NDD1 294 aaKnown RBP22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 LNX1Q8TBB1 728 aaPredicted RBP22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 LBHD1Q9BQE6 289 aaPredicted RBP22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 FAM114A2Q9NRY5 505 aa22.22■■□□□ 1.15
MAP1LC3B-206ENST00000564844 A0A1B0GUL6 1792 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 CCDC188H7C350 402 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ACSL3O95573 720 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 BTDP43251 543 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 ZNF746Q6NUN9 644 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 CCDC50Q8IVM0 306 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 CCNHP51946 323 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 PLS1Q14651 629 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 NFIXQ14938 502 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 LACTB2Q53H82 288 aaPredicted RBP22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 SLC17A8Q8NDX2 589 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 CEP63Q96MT8 703 aa22.21■■□□□ 1.15
MAP1LC3B-206ENST00000564844 IGF2BP3O00425 579 aaKnown RBP eCLIP22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 GCNT3O95395 438 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 ATXN2LQ8WWM7 1075 aaKnown RBP22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 CNKSR2Q8WXI2 1034 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 TLCD1Q96CP7 247 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 ERP44Q9BS26 406 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 THAP2Q9H0W7 228 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 PCDHA2Q9Y5H9 948 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 TCP11X1B4DZS4 312 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 PPP1R11O60927 126 aaPredicted RBP22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 BAG3O95817 575 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 GCKP35557 465 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 ALDH5A1P51649 535 aaPredicted RBP22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 VPS36Q86VN1 386 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 JAMLQ86YT9 394 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 KRT35Q92764 455 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 CALR3Q96L12 384 aaKnown RBP22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 CTNNAL1Q9UBT7 734 aa22.2■■□□□ 1.14
MAP1LC3B-206ENST00000564844 TBK1Q9UHD2 729 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms