RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 FLOT1O75955 427 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 GOLGA6DP0CG33 693 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 TRIM49P0CI25 452 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 TRIM49CP0CI26 452 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 TNFRSF8P28908 595 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 PLS1Q14651 629 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 TRADDQ15628 312 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 KCTD19Q17RG1 926 aaPredicted RBP24.39■■□□□ 1.5
SPSB3-206ENST00000564709 GLE1Q53GS7 698 aaKnown RBP24.39■■□□□ 1.5
SPSB3-206ENST00000564709 C10orf76Q5T2E6 689 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 LRRC31Q6UY01 552 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 IFT20Q8IY31 132 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 GOLGA6AQ9NYA3 693 aa24.39■■□□□ 1.5
SPSB3-206ENST00000564709 BTNL10A8MVZ5 291 aa24.39■■□□□ 1.49
SPSB3-206ENST00000564709 DDX3XO00571 662 aaKnown RBP eCLIP24.39■■□□□ 1.49
SPSB3-206ENST00000564709 VIL1P09327 827 aaKnown RBP24.39■■□□□ 1.49
SPSB3-206ENST00000564709 U2AF1L4Q8WU68 220 aaKnown RBP24.39■■□□□ 1.49
SPSB3-206ENST00000564709 TMEM39BQ9GZU3 492 aa24.39■■□□□ 1.49
SPSB3-206ENST00000564709 GDF3Q9NR23 364 aa24.39■■□□□ 1.49
SPSB3-206ENST00000564709 KIF4AO95239 1232 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 DLGAP5Q15398 846 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 ODR4Q5SWX8 454 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 MAEAQ7L5Y9 396 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 LRRC57Q8N9N7 239 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 USP38Q8NB14 1042 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 LXNQ9BS40 222 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 SYNPO2Q9UMS6 1093 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 SLC15A2Q16348 729 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 CBWD6Q4V339 395 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 CBWD3Q5JTY5 395 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 CBWD5Q5RIA9 395 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 RSBN1LQ6PCB5 846 aaPredicted RBP24.38■■□□□ 1.49
SPSB3-206ENST00000564709 ZNF720Q7Z2F6 126 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 FAM76AQ8TAV0 307 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 CHURC1Q8WUH1 139 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 FAM151AQ8WW52 585 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 CAVIN3Q969G5 261 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 VCPKMTQ9H867 229 aa24.38■■□□□ 1.49
SPSB3-206ENST00000564709 CWC15Q9P013 229 aaKnown RBP24.38■■□□□ 1.49
SPSB3-206ENST00000564709 MRPL11Q9Y3B7 192 aaKnown RBP24.38■■□□□ 1.49
SPSB3-206ENST00000564709 PSME4Q14997 1843 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 RAD51CO43502 376 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 FMO5P49326 533 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 GUCY2FP51841 1108 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 LDHDQ86WU2 507 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 CASKIN2Q8WXE0 1202 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 AGPAT3Q9NRZ7 376 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 FBXL5Q9UKA1 691 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 NENFQ9UMX5 172 aa24.37■■□□□ 1.49
SPSB3-206ENST00000564709 TMCO5BA8MYB1 307 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 PPP1R12BO60237 982 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-206ENST00000564709 EVI5O60447 810 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 TRAF1Q13077 416 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 PROCA1Q8NCQ7 364 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-206ENST00000564709 TPCN2Q8NHX9 752 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 LNX1Q8TBB1 728 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-206ENST00000564709 NACC1Q96RE7 527 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 SCAF8Q9UPN6 1271 aaKnown RBP24.36■■□□□ 1.49
SPSB3-206ENST00000564709 BCS1LQ9Y276 419 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 GTPBP10A4D1E9 387 aaKnown RBP24.36■■□□□ 1.49
SPSB3-206ENST00000564709 CEP104O60308 925 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 VPS36Q86VN1 386 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 RDH13Q8NBN7 331 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 TEKT3Q9BXF9 490 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 LCMT1Q9UIC8 334 aa24.36■■□□□ 1.49
SPSB3-206ENST00000564709 F8VZ95 297 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 IPO5O00410 1097 aaKnown RBP24.35■■□□□ 1.49
SPSB3-206ENST00000564709 H2AFZP0C0S5 128 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 H2AFVQ71UI9 128 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 HS2ST1Q7LGA3 356 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 AGBL1Q96MI9 1066 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 ZIM3Q96PE6 472 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 RUFY1Q96T51 708 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 EHMT1Q9H9B1 1298 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 HSF2BPO75031 334 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 RPS6KA5O75582 802 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 FERP16591 822 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 STAT1P42224 750 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 ZNF131P52739 623 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 GLYCTKQ8IVS8 523 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 KCTD17Q8N5Z5 321 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 ARL8AQ96BM9 186 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 CCDC43Q96MW1 224 aaKnown RBP24.35■■□□□ 1.49
SPSB3-206ENST00000564709 SH3GL2Q99962 352 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 AP1M1Q9BXS5 423 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 WDR11Q9BZH6 1224 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 DNAJC12Q9UKB3 198 aa24.35■■□□□ 1.49
SPSB3-206ENST00000564709 HIP1RO75146 1068 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 PAK2Q13177 524 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 DRAP1Q14919 205 aaPredicted RBP24.34■■□□□ 1.49
SPSB3-206ENST00000564709 OLIG1Q8TAK6 271 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 FRMD4BQ9Y2L6 1034 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 COL4A5P29400 1685 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 ARHGEF35A5YM69 484 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 SOX5P35711 763 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 TNNC1P63316 161 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 IFI16Q16666 785 aaKnown RBP24.34■■□□□ 1.49
SPSB3-206ENST00000564709 GRIPAP1Q4V328 841 aa24.34■■□□□ 1.49
SPSB3-206ENST00000564709 TTMPQ5BVD1 217 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms