RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 MAMDC4Q6UXC1 1216 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 UBE2Q1Q7Z7E8 422 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 IRF2BP1Q8IU81 584 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MYOCDQ8IZQ8 938 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SAMD3Q8N6K7 520 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DNERQ8NFT8 737 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NSUN6Q8TEA1 469 aaKnown RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 U2AF1L4Q8WU68 220 aaKnown RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 LENG1Q96BZ8 264 aaPredicted RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DNAJC19Q96DA6 116 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ZFP91Q96JP5 570 aaPredicted RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TUBGCP2Q9BSJ2 902 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 POLR3CQ9BUI4 534 aaPredicted RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 WDR11Q9BZH6 1224 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ABHD16BQ9H3Z7 469 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TUFT1Q9NNX1 390 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PXMP2Q9NR77 195 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DDX20Q9UHI6 824 aaKnown RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 VAV3Q9UKW4 847 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 FAM184BQ9ULE4 1060 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DNM3Q9UQ16 869 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PPP2R2CQ9Y2T4 447 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SEPT4O43236 478 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GAS7O60861 476 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TBCAO75347 108 aaKnown RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SGPL1O95470 568 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GYPCP04921 128 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NR3C2P08235 984 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CCDC175P0C221 793 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ZNF865P0CJ78 1059 aaPredicted RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RARBP10826 455 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CYP11B2P19099 503 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MUTP22033 750 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 FECHP22830 423 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CCND2P30279 289 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 VASPP50552 380 aaPredicted RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GHRHRQ02643 423 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PGM5Q15124 567 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 STXBP2Q15833 593 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CEP55Q53EZ4 464 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SEPT14Q6ZU15 432 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CATSPER3Q86XQ3 398 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TMTC1Q8IUR5 882 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 IL31RAQ8NI17 732 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NEK9Q8TD19 979 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CPLX3Q8WVH0 158 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 HPS3Q969F9 1004 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 UIMC1Q96RL1 719 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 EIF2AK1Q9BQI3 630 aaKnown RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PDCD2LQ9BRP1 358 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NOC4LQ9BVI4 516 aaKnown RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NUP58Q9BVL2 599 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TEKT3Q9BXF9 490 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MAF1Q9H063 256 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SEMA6BQ9H3T3 888 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 VTA1Q9NP79 307 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PAK6Q9NQU5 681 aaPredicted RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PRDM6Q9NQX0 595 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PDGFCQ9NRA1 345 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MAP3K20Q9NYL2 800 aaKnown RBP8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RAPGEFL1Q9UHV5 662 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PHLPP2Q6ZVD8 1323 aa8.2□□□□□ -1.1
MAP1LC3B-205ENST00000564638 LOC102724159A0A0B4J2E5 919 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 FRMD3A2A2Y4 597 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MSCO60682 206 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PSMD10O75832 226 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 FARP2O94887 1054 aaPredicted RBP8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 EYA4O95677 639 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 IGHA2P01877 340 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SPATA31C1P0DKV0 1188 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GAP43P17677 238 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ADCYAP1R1P41586 468 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GJA8P48165 433 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SLC12A3P55017 1021 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CYP4A11Q02928 519 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TNFAIP2Q03169 654 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PPP2R5CQ13362 524 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PWP2Q15269 919 aaKnown RBP8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MAN2A1Q16706 1144 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TSR1Q2NL82 804 aaKnown RBP8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CCDC40Q4G0X9 1142 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 HERC4Q5GLZ8 1057 aaPredicted RBP8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GJC2Q5T442 439 aaPredicted RBP8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CYP26C1Q6V0L0 522 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 LRRC55Q6ZSA7 311 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 Q7L0L9 218 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NIPA1Q7RTP0 329 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SYT2Q8N9I0 419 aaPredicted RBP8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ZNF507Q8TCN5 953 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MORC4Q8TE76 937 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CEP63Q96MT8 703 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 IWS1Q96ST2 819 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ZNF577Q9BSK1 485 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 KATNBL1Q9H079 304 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ZHX3Q9H4I2 956 aa8.19□□□□□ -1.1
MAP1LC3B-205ENST00000564638 XPNPEP3Q9NQH7 507 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms