RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 NOD1Q9Y239 953 aa13.9□□□□□ -0.18
KARS-204ENST00000564578 UMODL1Q5DID0 1318 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 PDE4DIPQ5VU43 2346 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 SMIM35A0A1B0GVV1 85 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 TLR3O15455 904 aaKnown RBP13.89□□□□□ -0.19
KARS-204ENST00000564578 EVI5O60447 810 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 PFKFB1P16118 471 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 TXLNAP40222 546 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 CLCN3P51790 818 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 RRAGBQ5VZM2 374 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 PADI6Q6TGC4 694 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 RPAINQ86UA6 219 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 SYT2Q8N9I0 419 aaPredicted RBP13.89□□□□□ -0.19
KARS-204ENST00000564578 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
KARS-204ENST00000564578 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 PPME1Q9Y570 386 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 EVPLQ92817 2033 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 LAMA3Q16787 3333 aa13.89□□□□□ -0.19
KARS-204ENST00000564578 POLR2DO15514 142 aaKnown RBP13.88□□□□□ -0.19
KARS-204ENST00000564578 GADD45BO75293 160 aaPredicted RBP13.88□□□□□ -0.19
KARS-204ENST00000564578 DGAT1O75907 488 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 PLA2G4BP0C869 781 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 RFC5P40937 340 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 NDUFA8P51970 172 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 POLGP54098 1239 aaPredicted RBP13.88□□□□□ -0.19
KARS-204ENST00000564578 RBL2Q08999 1139 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 MCM6Q14566 821 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 ARSHQ5FYA8 562 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 C1orf186Q6ZWK4 172 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 C7orf61Q8IZ16 206 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 METTL13Q8N6R0 699 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 RASSF8Q8NHQ8 419 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 RAD54LQ92698 747 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 DPF3Q92784 378 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 ARHGEF35A5YM69 484 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 KIAA0355O15063 1070 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 USO1O60763 962 aaKnown RBP13.88□□□□□ -0.19
KARS-204ENST00000564578 CKBP12277 381 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 CYP11B2P19099 503 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 EMC2Q15006 297 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 RINT1Q6NUQ1 792 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 CCDC73Q6ZRK6 1079 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 LARP4BQ92615 738 aaKnown RBP13.88□□□□□ -0.19
KARS-204ENST00000564578 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 MTRQ99707 1265 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 RUSC1Q9BVN2 902 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 FAM49AQ9H0Q0 323 aaPredicted RBP13.88□□□□□ -0.19
KARS-204ENST00000564578 HIPK3Q9H422 1215 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 POLD4Q9HCU8 107 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
KARS-204ENST00000564578 ARID2Q68CP9 1835 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 STAT6P42226 847 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 FSIP1Q8NA03 581 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
KARS-204ENST00000564578 DHX58Q96C10 678 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 OSBPL7Q9BZF2 842 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 WNT8AQ9H1J5 351 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 GPRC5CQ9NQ84 441 aa13.87□□□□□ -0.19
KARS-204ENST00000564578 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
KARS-204ENST00000564578 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 PRPF40AO75400 957 aaKnown RBP13.86□□□□□ -0.19
KARS-204ENST00000564578 CHRNA1P02708 482 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 VTNP04004 478 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 CYP2C18P33260 490 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 THPOP40225 353 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 TMEM62Q0P6H9 643 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 DHX8Q14562 1220 aaKnown RBP13.86□□□□□ -0.19
KARS-204ENST00000564578 GPNMBQ14956 572 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 ZNF618Q5T7W0 954 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 MAEAQ7L5Y9 396 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 DAW1Q8N136 415 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 ENGASEQ8NFI3 743 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 CAGE1Q8TC20 777 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 CCDC43Q96MW1 224 aaKnown RBP13.86□□□□□ -0.19
KARS-204ENST00000564578 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 TIMP1P01033 207 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 SSBP05455 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
KARS-204ENST00000564578 SYN1P17600 705 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 TMOD1P28289 359 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 MGAT3Q09327 533 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 SNW1Q13573 536 aaKnown RBP13.86□□□□□ -0.19
KARS-204ENST00000564578 MBTPS1Q14703 1052 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 LONRF3Q496Y0 759 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 KSR1Q8IVT5 923 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 EXOC8Q8IYI6 725 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
KARS-204ENST00000564578 NME8Q8N427 588 aa13.86□□□□□ -0.19
KARS-204ENST00000564578 PRPF31Q8WWY3 499 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms