RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 GPR32O75388 356 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 PSMD10O75832 226 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 MMP1P03956 469 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 NONOQ15233 471 aaKnown RBP eCLIP16.92■□□□□ 0.3
SPG7-210ENST00000564409 KIZQ2M2Z5 673 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 TMEM266Q2M3C6 531 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 EFCAB12Q6NXP0 572 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 LINC01465Q8N7H1 131 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 ELAC1Q9H777 363 aaKnown RBP16.92■□□□□ 0.3
SPG7-210ENST00000564409 CDHR5Q9HBB8 845 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 PLAGL2Q9UPG8 496 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 MRPL42Q9Y6G3 142 aaKnown RBP16.92■□□□□ 0.3
SPG7-210ENST00000564409 STK36Q9NRP7 1315 aa16.92■□□□□ 0.3
SPG7-210ENST00000564409 GRXCR2A6NFK2 248 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 C9IYK1 514 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 GRM6O15303 877 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 ZNF862O60290 1169 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 FAM189BP81408 668 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 PRKCEQ02156 737 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 PTCRAQ6ISU1 281 aaPredicted RBP16.91■□□□□ 0.3
SPG7-210ENST00000564409 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.91■□□□□ 0.3
SPG7-210ENST00000564409 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 NAP1L4Q99733 375 aaKnown RBP16.91■□□□□ 0.3
SPG7-210ENST00000564409 SLKQ9H2G2 1235 aaPredicted RBP16.91■□□□□ 0.3
SPG7-210ENST00000564409 UNC45AQ9H3U1 944 aa16.91■□□□□ 0.3
SPG7-210ENST00000564409 XIRP2A4UGR9 3374 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 HOXA2O43364 376 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 PFKFB2O60825 505 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 VTNP04004 478 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 GCFC2P16383 781 aaKnown RBP16.9■□□□□ 0.3
SPG7-210ENST00000564409 EIF4BP23588 611 aaKnown RBP16.9■□□□□ 0.3
SPG7-210ENST00000564409 NLRP11P59045 1033 aaKnown RBP16.9■□□□□ 0.3
SPG7-210ENST00000564409 UBE3AQ05086 875 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 STK3Q13188 491 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 NPY5RQ15761 445 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 CTC1Q2NKJ3 1217 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 XKR3Q5GH77 459 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 B3GNT9Q6UX72 402 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 FAM228AQ86W67 206 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 WASF1Q92558 559 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 FAM20AQ96MK3 541 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 OSMRQ99650 979 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 NIFKQ9BYG3 293 aaKnown RBP16.9■□□□□ 0.3
SPG7-210ENST00000564409 TMEM161AQ9NX61 479 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 PRKAG3Q9UGI9 489 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 AKT3Q9Y243 479 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 PCDHB12Q9Y5F1 795 aa16.9■□□□□ 0.3
SPG7-210ENST00000564409 CCDC194A0A1B0GVG4 234 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 CHMP2AO43633 222 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 MGEA5O60502 916 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 DKC1O60832 514 aaKnown RBP eCLIP16.89■□□□□ 0.29
SPG7-210ENST00000564409 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
SPG7-210ENST00000564409 DNM2P50570 870 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 CLCN3P51790 818 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 DSC3Q14574 896 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 TARBP2Q15633 366 aaKnown RBP16.89■□□□□ 0.29
SPG7-210ENST00000564409 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
SPG7-210ENST00000564409 PPP4R3AQ6IN85 833 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 TRMT1LQ7Z2T5 733 aaKnown RBP16.89■□□□□ 0.29
SPG7-210ENST00000564409 ETNPPLQ8TBG4 499 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 SPPL3Q8TCT6 385 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 ADAMTS10Q9H324 1103 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 ATP6V0A4Q9HBG4 840 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 CLDND1Q9NY35 253 aa16.89■□□□□ 0.29
SPG7-210ENST00000564409 DDX25Q9UHL0 483 aaKnown RBP16.89■□□□□ 0.29
SPG7-210ENST00000564409 TDP2O95551 362 aa16.88■□□□□ 0.29
SPG7-210ENST00000564409 ITGB1P05556 798 aa16.88■□□□□ 0.29
SPG7-210ENST00000564409 SCRN1Q12765 414 aa16.88■□□□□ 0.29
SPG7-210ENST00000564409 PDE12Q6L8Q7 609 aaKnown RBP16.88■□□□□ 0.29
SPG7-210ENST00000564409 EXOC8Q8IYI6 725 aa16.88■□□□□ 0.29
SPG7-210ENST00000564409 KLHL23Q8NBE8 558 aa16.88■□□□□ 0.29
SPG7-210ENST00000564409 RSPH1Q8WYR4 309 aa16.88■□□□□ 0.29
SPG7-210ENST00000564409 JPH2Q9BR39 696 aaPredicted RBP16.88■□□□□ 0.29
SPG7-210ENST00000564409 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
SPG7-210ENST00000564409 ALG13Q9NP73 1137 aaKnown RBP16.88■□□□□ 0.29
SPG7-210ENST00000564409 TBX3O15119 743 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 GPC3P51654 580 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 HYAL1Q12794 435 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 PPP2R5CQ13362 524 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 UGCGQ16739 394 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 INF2Q27J81 1249 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 NEK8Q86SG6 692 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 GJD3Q8N144 294 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 LRRC71Q8N4P6 559 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 DACT1Q9NYF0 836 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 PPME1Q9Y570 386 aa16.87■□□□□ 0.29
SPG7-210ENST00000564409 PLXNA4Q9HCM2 1894 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 IGKV6-21A0A0C4DH24 114 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 TBKBP1A7MCY6 615 aa16.86■□□□□ 0.29
SPG7-210ENST00000564409 H3BQ06 376 aaPredicted RBP16.86■□□□□ 0.29
SPG7-210ENST00000564409 EOMESO95936 686 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms