RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 FAM177A1Q8N128 213 aaPredicted RBP19.92■□□□□ 0.78
NME3-205ENST00000563854 BANK1Q8NDB2 785 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 ZNF689Q96CS4 500 aaPredicted RBP19.92■□□□□ 0.78
NME3-205ENST00000563854 ADAM2Q99965 735 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 C11orf84Q9BUA3 381 aaPredicted RBP19.92■□□□□ 0.78
NME3-205ENST00000563854 UBE2ZQ9H832 354 aaPredicted RBP19.92■□□□□ 0.78
NME3-205ENST00000563854 ST3GAL5Q9UNP4 418 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 MRPL42Q9Y6G3 142 aaKnown RBP19.92■□□□□ 0.78
NME3-205ENST00000563854 TTC3P53804 2025 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 CYP3A7-CYP3A51PA0A087WV96 503 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 GPR182O15218 404 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 LARGE1O95461 756 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 CTDNEP1O95476 244 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 KCNA5P22460 613 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 CYP3A7P24462 503 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 NLRP11P59045 1033 aaKnown RBP19.91■□□□□ 0.78
NME3-205ENST00000563854 TBC1D8BQ0IIM8 1120 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 MTERF2Q49AM1 385 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 TCEAL5Q5H9L2 206 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 MOXD1Q6UVY6 613 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 PIK3AP1Q6ZUJ8 805 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 NEK8Q86SG6 692 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 FAM228AQ86W67 206 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 CMTR2Q8IYT2 770 aaKnown RBP19.91■□□□□ 0.78
NME3-205ENST00000563854 ETNPPLQ8TBG4 499 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 OXER1Q8TDS5 423 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 PCDHB7Q9Y5E2 793 aa19.91■□□□□ 0.78
NME3-205ENST00000563854 WDR81Q562E7 1941 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 TMEM150BA6NC51 233 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 GRM6O15303 877 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 MARCH6O60337 910 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 GPR32O75388 356 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 LINC00271P0C7V0 271 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 SARSP49591 514 aaKnown RBP19.9■□□□□ 0.78
NME3-205ENST00000563854 NEK4P51957 841 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 ME3Q16798 604 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 RDM1Q8NG50 284 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 WASF1Q92558 559 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 MBOAT7Q96N66 472 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 SH2D3AQ9BRG2 576 aa19.9■□□□□ 0.78
NME3-205ENST00000563854 NSUN3Q9H649 340 aaKnown RBP19.9■□□□□ 0.78
NME3-205ENST00000563854 C5orf67F2Z3F1 127 aa19.89■□□□□ 0.77
NME3-205ENST00000563854 CCNT1O60563 726 aaKnown RBP19.89■□□□□ 0.77
NME3-205ENST00000563854 RB1P06400 928 aa19.89■□□□□ 0.77
NME3-205ENST00000563854 SPOUT1Q5T280 376 aaKnown RBP19.89■□□□□ 0.77
NME3-205ENST00000563854 CLP1Q92989 425 aaKnown RBP19.89■□□□□ 0.77
NME3-205ENST00000563854 C1orf112Q9NSG2 853 aa19.89■□□□□ 0.77
NME3-205ENST00000563854 KIAA1671Q9BY89 1806 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 MUC3AQ02505 3323 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 TBKBP1A7MCY6 615 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 DDX11L8A8MPP1 907 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 KRT2P35908 639 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 XKR3Q5GH77 459 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 CRIPAKQ8N1N5 446 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 NLRP7Q8WX94 980 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 GTF3C6Q969F1 213 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 BRMS1Q9HCU9 246 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 ALG13Q9NP73 1137 aaKnown RBP19.88■□□□□ 0.77
NME3-205ENST00000563854 RGS18Q9NS28 235 aa19.88■□□□□ 0.77
NME3-205ENST00000563854 FAM205CA6NFA0 338 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 EIF5BO60841 1220 aaKnown RBP19.87■□□□□ 0.77
NME3-205ENST00000563854 SEC24BO95487 1268 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 GCFC2P16383 781 aaKnown RBP19.87■□□□□ 0.77
NME3-205ENST00000563854 FGFR4P22455 802 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 NR5A1Q13285 461 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 SLC24A5Q71RS6 500 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 LINC01465Q8N7H1 131 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 LMAN2LQ9H0V9 348 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 ADAMTS10Q9H324 1103 aa19.87■□□□□ 0.77
NME3-205ENST00000563854 C9IYK1 514 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 H3BQ06 376 aaPredicted RBP19.86■□□□□ 0.77
NME3-205ENST00000563854 EML1O00423 815 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 JAK2O60674 1132 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 FGFR1P11362 822 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 FDPSP14324 419 aaKnown RBP19.86■□□□□ 0.77
NME3-205ENST00000563854 GPC3P51654 580 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 DRP2Q13474 957 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 EARS2Q5JPH6 523 aaKnown RBP19.86■□□□□ 0.77
NME3-205ENST00000563854 FAM102BQ5T8I3 360 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 PLA2G4FQ68DD2 849 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 B3GNT9Q6UX72 402 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 POTEDQ86YR6 584 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 PLVAPQ9BX97 442 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 ATP6V0A4Q9HBG4 840 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 CLDND1Q9NY35 253 aa19.86■□□□□ 0.77
NME3-205ENST00000563854 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.85■□□□□ 0.77
NME3-205ENST00000563854 MMP1P03956 469 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 ZSCAN20P17040 1043 aaPredicted RBP19.85■□□□□ 0.77
NME3-205ENST00000563854 EIF4BP23588 611 aaKnown RBP19.85■□□□□ 0.77
NME3-205ENST00000563854 PSMC5P62195 406 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 TRIM29Q14134 588 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 TARBP2Q15633 366 aaKnown RBP19.85■□□□□ 0.77
NME3-205ENST00000563854 NCAPH2Q6IBW4 605 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 PPP4R3AQ6IN85 833 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 KLHL23Q8NBE8 558 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 RNF169Q8NCN4 708 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 NSUN7Q8NE18 718 aaKnown RBP19.85■□□□□ 0.77
NME3-205ENST00000563854 FAM20AQ96MK3 541 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 NAP1L4Q99733 375 aaKnown RBP19.85■□□□□ 0.77
NME3-205ENST00000563854 NIFKQ9BYG3 293 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms