RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 MRE11P49959 708 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 STAT5BP51692 787 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 SLC6A3Q01959 620 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 TBR1Q16650 682 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 TTC38Q5R3I4 469 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 SLFN12LQ6IEE8 588 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 TCTN3Q6NUS6 607 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 USP30Q70CQ3 517 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 LRRTM3Q86VH5 581 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 TAX1BP1Q86VP1 789 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 NME9Q86XW9 330 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 KIF18BQ86Y91 864 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 GIMAP8Q8ND71 665 aaPredicted RBP5.42□□□□□ -1.54
GDE1-202ENST00000563645 MAML3Q96JK9 1138 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 C16orf92Q96LL3 132 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 KLC2Q9H0B6 622 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 OR10A2Q9H208 303 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 MSL2Q9HCI7 577 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 PLAAQ9Y263 795 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 MYRFQ9Y2G1 1151 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 ZKSCAN5Q9Y2L8 839 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 TCAF1Q9Y4C2 921 aa5.42□□□□□ -1.54
GDE1-202ENST00000563645 MATN2O00339 956 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 FOXS1O43638 330 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 ZNF623O75123 536 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 CR2P20023 1033 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 PTX3P26022 381 aaPredicted RBP5.41□□□□□ -1.54
GDE1-202ENST00000563645 RGS3P49796 1198 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 NEK4P51957 841 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 NOLC1Q14978 699 aaKnown RBP eCLIP5.41□□□□□ -1.54
GDE1-202ENST00000563645 ZXDCQ2QGD7 858 aaPredicted RBP5.41□□□□□ -1.54
GDE1-202ENST00000563645 ESRP1Q6NXG1 681 aaKnown RBP5.41□□□□□ -1.54
GDE1-202ENST00000563645 GGNQ86UU5 652 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 BCL6BQ8N143 479 aaPredicted RBP5.41□□□□□ -1.54
GDE1-202ENST00000563645 OR5AN1Q8NGI8 311 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 Q8TCH9 128 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 CFHR4Q92496 578 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 WWC2-AS2Q96NR7 200 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 CDK5RAP1Q96SZ6 601 aaKnown RBP5.41□□□□□ -1.54
GDE1-202ENST00000563645 ELF4Q99607 663 aaPredicted RBP5.41□□□□□ -1.54
GDE1-202ENST00000563645 DPYSL5Q9BPU6 564 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 DEF6Q9H4E7 631 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 OXSMQ9NWU1 459 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 ZFR2Q9UPR6 939 aaKnown RBP5.41□□□□□ -1.54
GDE1-202ENST00000563645 TSC22D4Q9Y3Q8 395 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 SPO11Q9Y5K1 396 aa5.41□□□□□ -1.54
GDE1-202ENST00000563645 ENPP3O14638 875 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 CDC14BO60729 498 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 GAS7O60861 476 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 F2P00734 622 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 INSRRP14616 1297 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 ATP2A2P16615 1042 aaKnown RBP5.4□□□□□ -1.54
GDE1-202ENST00000563645 SLC9A1P19634 815 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 DSG1Q02413 1049 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 CDSNQ15517 529 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 PRAMEF9Q5VWM5 478 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 ZNF585AQ6P3V2 769 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 CNNM4Q6P4Q7 775 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 KIAA0907Q7Z7F0 614 aaPredicted RBP5.4□□□□□ -1.54
GDE1-202ENST00000563645 NOP9Q86U38 636 aaKnown RBP5.4□□□□□ -1.54
GDE1-202ENST00000563645 DHX37Q8IY37 1157 aaKnown RBP5.4□□□□□ -1.54
GDE1-202ENST00000563645 PPM1KQ8N3J5 372 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 MFSD3Q96ES6 412 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 MTFR1LQ9H019 292 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 TOMM22Q9NS69 142 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 PUF60Q9UHX1 559 aaKnown RBP5.4□□□□□ -1.54
GDE1-202ENST00000563645 JAG2Q9Y219 1238 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 VWA7Q9Y334 891 aa5.4□□□□□ -1.54
GDE1-202ENST00000563645 ZNF891A8MT65 544 aaPredicted RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 RAD17O75943 681 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 CENPBP07199 599 aaPredicted RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 SESN2P58004 480 aaPredicted RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 HGFACQ04756 655 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 ADCY1Q08828 1119 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 DUSP8Q13202 625 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 PUM1Q14671 1186 aaKnown RBP eCLIP5.39□□□□□ -1.55
GDE1-202ENST00000563645 DGKDQ16760 1214 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 HS1BP3Q53T59 392 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 DALRD3Q5D0E6 543 aaKnown RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 KLHDC10Q6PID8 442 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 FUKQ8N0W3 1084 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 EFHBQ8N7U6 833 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 C7orf31Q8N865 590 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 OR14K1Q8NGZ2 314 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 TUBGCP5Q96RT8 1024 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 TARS2Q9BW92 718 aaKnown RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 PLA2G12BQ9BX93 195 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 C12orf65Q9H3J6 166 aaKnown RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 SEMA4AQ9H3S1 761 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 H2AFY2Q9P0M6 372 aaPredicted RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 USP35Q9P2H5 1018 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
GDE1-202ENST00000563645 FAM184BQ9ULE4 1060 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 SLC30A1Q9Y6M5 507 aa5.39□□□□□ -1.55
GDE1-202ENST00000563645 MUSKO15146 869 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 MYBPC3Q14896 1274 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 R3HDM1Q15032 1099 aaKnown RBP5.38□□□□□ -1.55
GDE1-202ENST00000563645 PHYKPLQ8IUZ5 450 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms