RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 TACR2P21452 398 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 COMTP21964 271 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 APEX1P27695 318 aaKnown RBP6.54□□□□□ -1.36
CHD9-206ENST00000562791 KIF11P52732 1056 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 HGFACQ04756 655 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 RTKN2Q8IZC4 609 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 WDR48Q8TAF3 677 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 MRFAP1L1Q96HT8 127 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 VPS11Q9H270 941 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 C12orf65Q9H3J6 166 aaKnown RBP6.54□□□□□ -1.36
CHD9-206ENST00000562791 SEMA4AQ9H3S1 761 aa6.54□□□□□ -1.36
CHD9-206ENST00000562791 PTPDC1A2A3K4 754 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 FSHBP01225 129 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 PRLP01236 227 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 ASLP04424 464 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 RGS3P49796 1198 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 MEOX1P50221 254 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 CCDC144BQ3MJ40 725 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 PIK3R6Q5UE93 754 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 GPR135Q8IZ08 494 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 SLC16A11Q8NCK7 471 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 CALML6Q8TD86 181 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 FOXB1Q99853 325 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 TMEM260Q9NX78 707 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
CHD9-206ENST00000562791 MAGEL2Q9UJ55 1249 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 FAM184BQ9ULE4 1060 aa6.53□□□□□ -1.36
CHD9-206ENST00000562791 B4E1Z4 1266 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 ASMTLO95671 621 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 AMHP03971 560 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 ACO1P21399 889 aaKnown RBP6.52□□□□□ -1.37
CHD9-206ENST00000562791 FNTBP49356 437 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 PRKD1Q15139 912 aaPredicted RBP6.52□□□□□ -1.37
CHD9-206ENST00000562791 ARHGAP44Q17R89 818 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 HS1BP3Q53T59 392 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 CREB3L3Q68CJ9 461 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 POLNQ7Z5Q5 900 aa6.52□□□□□ -1.37
CHD9-206ENST00000562791 JMJD7P0C870 316 aa6.51□□□□□ -1.37
CHD9-206ENST00000562791 PTX3P26022 381 aaPredicted RBP6.51□□□□□ -1.37
CHD9-206ENST00000562791 STAT3P40763 770 aa6.51□□□□□ -1.37
CHD9-206ENST00000562791 SLC6A3Q01959 620 aa6.51□□□□□ -1.37
CHD9-206ENST00000562791 FOXL1Q12952 345 aa6.51□□□□□ -1.37
CHD9-206ENST00000562791 PABPC4Q13310 644 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHD9-206ENST00000562791 ADAM15Q13444 863 aa6.51□□□□□ -1.37
CHD9-206ENST00000562791 ZNF808Q8N4W9 903 aaPredicted RBP6.51□□□□□ -1.37
CHD9-206ENST00000562791 KIAA1958Q8N8K9 716 aa6.51□□□□□ -1.37
CHD9-206ENST00000562791 EDAQ92838 391 aa6.51□□□□□ -1.37
CHD9-206ENST00000562791 AGO3Q9H9G7 860 aaKnown RBP6.51□□□□□ -1.37
CHD9-206ENST00000562791 CBX4O00257 560 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 MSX2P35548 267 aaPredicted RBP6.5□□□□□ -1.37
CHD9-206ENST00000562791 ANTXR2P58335 489 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 SAFB2Q14151 953 aaKnown RBP eCLIP6.5□□□□□ -1.37
CHD9-206ENST00000562791 ACAP1Q15027 740 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 MAMDC4Q6UXC1 1216 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 OR5AN1Q8NGI8 311 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 UBXN4Q92575 508 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 PKNOX2Q96KN3 472 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 C16orf92Q96LL3 132 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 PCIF1Q9H4Z3 704 aa6.5□□□□□ -1.37
CHD9-206ENST00000562791 CTDP1Q9Y5B0 961 aaPredicted RBP6.5□□□□□ -1.37
CHD9-206ENST00000562791 SLC26A4O43511 780 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 RPS19P39019 145 aaKnown RBP6.49□□□□□ -1.37
CHD9-206ENST00000562791 MAP3K12Q12852 859 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 USP39Q53GS9 565 aaKnown RBP6.49□□□□□ -1.37
CHD9-206ENST00000562791 CDCA2Q69YH5 1023 aaPredicted RBP6.49□□□□□ -1.37
CHD9-206ENST00000562791 ESRP1Q6NXG1 681 aaKnown RBP6.49□□□□□ -1.37
CHD9-206ENST00000562791 RNF207Q6ZRF8 634 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 MAML3Q96JK9 1138 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 DRC1Q96MC2 740 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 CABP5Q9NP86 173 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 PLA2G3Q9NZ20 509 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 B4GALT6Q9UBX8 382 aa6.49□□□□□ -1.37
CHD9-206ENST00000562791 UBA6A0AVT1 1052 aaPredicted RBP6.48□□□□□ -1.37
CHD9-206ENST00000562791 FAM83GA6ND36 823 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 H7C1D1 291 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 PLSCR1O15162 318 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 SLPIP03973 132 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 SLC9A1P19634 815 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 ACVRL1P37023 503 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 ROM1Q03395 351 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 RIN1Q13671 783 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 SLFN12LQ6IEE8 588 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 SHCBP1Q8NEM2 672 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 EXTL1Q92935 676 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 RNPC3Q96LT9 517 aaKnown RBP6.48□□□□□ -1.37
CHD9-206ENST00000562791 ACSS2Q9NR19 701 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 H2AFY2Q9P0M6 372 aaPredicted RBP6.48□□□□□ -1.37
CHD9-206ENST00000562791 SRRDQ9UH36 339 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 CD2APQ9Y5K6 639 aa6.48□□□□□ -1.37
CHD9-206ENST00000562791 RFPL3O75679 317 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 ADAM8P78325 824 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 MYBPC3Q14896 1274 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 TKFCQ3LXA3 575 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 NRN1LQ496H8 165 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 PRAMEF9Q5VWM5 478 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 IGFL4Q6B9Z1 124 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 KLHDC10Q6PID8 442 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 ZFPM1Q8IX07 1006 aa6.47□□□□□ -1.37
CHD9-206ENST00000562791 NKD2Q969F2 451 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms