RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 DUSP6Q16828 381 aa18.81■□□□□ 0.6
CMTM3-205ENST00000562707 ZNF746Q6NUN9 644 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-205ENST00000562707 TRMT1LQ7Z2T5 733 aaKnown RBP18.81■□□□□ 0.6
CMTM3-205ENST00000562707 FAM228AQ86W67 206 aa18.81■□□□□ 0.6
CMTM3-205ENST00000562707 RPGRIP1Q96KN7 1286 aa18.81■□□□□ 0.6
CMTM3-205ENST00000562707 CEP131Q9UPN4 1083 aa18.81■□□□□ 0.6
CMTM3-205ENST00000562707 MAFBQ9Y5Q3 323 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-205ENST00000562707 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 CCDC196A0A1B0GTZ2 297 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 ZBTB42B2RXF5 422 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 MAGEB2O15479 319 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 HOXA2O43364 376 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 C22orf31O95567 290 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 VTNP04004 478 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 PSAPP07602 524 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 HMGB1P09429 215 aaKnown RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 FGFR1P11362 822 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 ATF7P17544 494 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 CDC27P30260 824 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 RCAN1P53805 252 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 ZXDAP98168 799 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 SETQ01105 290 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 PFKFB3Q16875 520 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 TSGA10IPQ3SY00 556 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 SUGP1Q8IWZ8 645 aaKnown RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 SMAP1Q8IYB5 467 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 CCDC12Q8WUD4 166 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 FAM217BQ9NTX9 383 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-205ENST00000562707 LZTS1Q9Y250 596 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 PCDHA10Q9Y5I2 948 aa18.8■□□□□ 0.6
CMTM3-205ENST00000562707 GPR32O75388 356 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 ZSCAN20P17040 1043 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-205ENST00000562707 TMOD1P28289 359 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 ABI1Q8IZP0 508 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 CRYGNQ8WXF5 182 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 MRPS27Q92552 414 aaKnown RBP18.79■□□□□ 0.6
CMTM3-205ENST00000562707 MAP7D2Q96T17 732 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 PRRX2Q99811 253 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 TMEM117Q9H0C3 514 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 CWH43Q9H720 699 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 GABBR1Q9UBS5 961 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 SAMM50Q9Y512 469 aa18.79■□□□□ 0.6
CMTM3-205ENST00000562707 ESYT2A0FGR8 921 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 FSCN2O14926 492 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 ADD1P35611 737 aaKnown RBP18.78■□□□□ 0.6
CMTM3-205ENST00000562707 METAP2P50579 478 aaKnown RBP eCLIP18.78■□□□□ 0.6
CMTM3-205ENST00000562707 PLCB3Q01970 1234 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 KRT17Q04695 432 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 DSC3Q14574 896 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 ADCK5Q3MIX3 580 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 BMP2KLQ5H9B9 411 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 RASEFQ8IZ41 740 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 REXO1Q8N1G1 1221 aaKnown RBP18.78■□□□□ 0.6
CMTM3-205ENST00000562707 ZNF710Q8N1W2 664 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 FAM167AQ96KS9 214 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 ZMYND12Q9H0C1 365 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 HCSTQ9UBK5 93 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 AKT3Q9Y243 479 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 PIEZO1Q92508 2521 aa18.78■□□□□ 0.6
CMTM3-205ENST00000562707 GNA11P29992 359 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 TECP42680 631 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 NLRP11P59045 1033 aaKnown RBP18.77■□□□□ 0.6
CMTM3-205ENST00000562707 RBM10P98175 930 aaKnown RBP18.77■□□□□ 0.6
CMTM3-205ENST00000562707 APOBRQ0VD83 1088 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 PRR16Q569H4 304 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 PLPP4Q5VZY2 271 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 EFCAB12Q6NXP0 572 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 TMEM184AQ6ZMB5 413 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 VN1R2Q8NFZ6 395 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 SUSD6Q92537 303 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 ZNF558Q96NG5 402 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 TCF25Q9BQ70 676 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 NGRNQ9NPE2 291 aaKnown RBP18.77■□□□□ 0.6
CMTM3-205ENST00000562707 ENTPD7Q9NQZ7 604 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 NRBP2Q9NSY0 501 aa18.77■□□□□ 0.6
CMTM3-205ENST00000562707 PPM1AP35813 382 aa18.76■□□□□ 0.59
CMTM3-205ENST00000562707 CLCN3P51790 818 aa18.76■□□□□ 0.59
CMTM3-205ENST00000562707 PTPN5P54829 565 aa18.76■□□□□ 0.59
CMTM3-205ENST00000562707 AKAP17AQ02040 695 aaKnown RBP18.76■□□□□ 0.59
CMTM3-205ENST00000562707 ANKRD54Q6NXT1 300 aa18.76■□□□□ 0.59
CMTM3-205ENST00000562707 KCNT2Q6UVM3 1135 aa18.76■□□□□ 0.59
CMTM3-205ENST00000562707 FBXL6Q8N531 539 aa18.76■□□□□ 0.59
CMTM3-205ENST00000562707 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
CMTM3-205ENST00000562707 WDR64B1ANS9 1081 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 EIF4BP23588 611 aaKnown RBP18.75■□□□□ 0.59
CMTM3-205ENST00000562707 SIGLEC14Q08ET2 396 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 TMC7Q7Z402 723 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 ECHDC2Q86YB7 292 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 LRRC43Q8N309 656 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 LRRC71Q8N4P6 559 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 RNF169Q8NCN4 708 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 BICD2Q8TD16 824 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 RASGRP4Q8TDF6 673 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 SCLT1Q96NL6 688 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 S1PR5Q9H228 398 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 ADAMTS10Q9H324 1103 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 SPG21Q9NZD8 308 aa18.75■□□□□ 0.59
CMTM3-205ENST00000562707 PRPF3O43395 683 aaKnown RBP18.74■□□□□ 0.59
CMTM3-205ENST00000562707 HOXB8P17481 243 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms