RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZKSCAN4Q969J2 545 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 GPBP1L1Q9HC44 474 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 TOPORSQ9NS56 1045 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 FEZ2Q9UHY8 353 aaPredicted RBP8.2□□□□□ -1.1
TCF4-216ENST00000562680 ACTN4O43707 911 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 RPLP2P05387 115 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 CASP14P31944 242 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 PPIL2Q13356 520 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 WHAMMP3Q1A5X7 153 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 PCNX4Q63HM2 1172 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 FRMD5Q7Z6J6 570 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 ADSSL1Q8N142 457 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 CCDC77Q9BR77 488 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 MSTO1Q9BUK6 570 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 TMEM60Q9H2L4 133 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 FBXO28Q9NVF7 368 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 MTRF1LQ9UGC7 380 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 MANSC4A6NHS7 340 aaPredicted RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 PP2D1A8MPX8 630 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 GGPS1O95749 300 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 LAMC2Q13753 1193 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 MXD4Q14582 209 aaPredicted RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 U2AF1L4Q8WU68 220 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 NLRP7Q8WX94 980 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 MKNK1Q9BUB5 465 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 RPF1Q9H9Y2 349 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 LMAN1P49257 510 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 ST3GAL1Q11201 340 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 TAF12Q16514 161 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 ENOSF1Q7L5Y1 443 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 DPH6Q7L8W6 267 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 PEX26Q7Z412 305 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 MRPL4Q9BYD3 311 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 RANBP17Q9H2T7 1088 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 AMFRQ9UKV5 643 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 SORBS3O60504 671 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 ZNF280AP59817 542 aaPredicted RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 CCDC50Q8IVM0 306 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 IFT122Q9HBG6 1241 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 KCNH7Q9NS40 1196 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 GCNT4Q9P109 453 aa8.19□□□□□ -1.1
TCF4-216ENST00000562680 CICQ96RK0 1608 aaPredicted RBP8.19□□□□□ -1.1
TCF4-216ENST00000562680 C5P01031 1676 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 CLIC2O15247 247 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 STRNO43815 780 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 SERPING1P05155 500 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 TGFB3P10600 412 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 ANXA13P27216 316 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 SLC26A2P50443 739 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 CFAP221Q4G0U5 840 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 RBM43Q6ZSC3 357 aaKnown RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 CEP72Q9P209 647 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 LCMT1Q9UIC8 334 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 TMEM110-MUSTN1A8MSY1 372 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 CLDN3O15551 220 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 TPD52L2O43399 206 aaKnown RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 CYP3A4P08684 503 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 PRR29P0C7W0 189 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 CLNS1AP54105 237 aaKnown RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 LACTBP83111 547 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 CATSPER4Q7RTX7 472 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 HAUS6Q7Z4H7 955 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 LIMA1Q9UHB6 759 aaKnown RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 DENND3A2RUS2 1198 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 MED7O43513 233 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 PRAMEF18Q5VWM3 479 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 CDCA5Q96FF9 252 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 STMN4Q9H169 189 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 POLR3FQ9H1D9 316 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 HYOU1Q9Y4L1 999 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 UBE2Q2LH0YL09 131 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 PIK3CDO00329 1044 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 MSH4O15457 936 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 HBP1O60381 514 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 PTPRAP18433 802 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 NSFP46459 744 aaKnown RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 CALCOCO2Q13137 446 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 SYT2Q8N9I0 419 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 RSRC1Q96IZ7 334 aaKnown RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 FAM193BQ96PV7 902 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 PDCD2LQ9BRP1 358 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 C4BP0C0L5 1744 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 NUP188Q5SRE5 1749 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 MFAP3LO75121 409 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 HIP1RO75146 1068 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 ZRANB2O95218 330 aaKnown RBP eCLIP8.18□□□□□ -1.1
TCF4-216ENST00000562680 TOB1P50616 345 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 INHBEP58166 350 aa8.18□□□□□ -1.1
TCF4-216ENST00000562680 SYTL5Q8TDW5 730 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 GCOM2Q9BZD3 368 aaPredicted RBP8.18□□□□□ -1.1
TCF4-216ENST00000562680 ATRNL1Q5VV63 1379 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 GOLGA6L7A0A1B0GV03 622 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 RRN3P2A6NIE6 340 aa8.17□□□□□ -1.1
TCF4-216ENST00000562680 NKRFO15226 690 aaKnown RBP eCLIP8.17□□□□□ -1.1
TCF4-216ENST00000562680 LRMPQ12912 555 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms